Gene
| Gene Model ID | pfu_aug2.0_68.1_26783 |
|---|---|
| Locus | scaffold68.1 : 243360 ... 252647 : + |
| To GenomeBrowser | scaffold68.1:243360..252647 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_19819.1_11264 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26783.t1 | 2 | 1 | TPT | 3 | 40 | 2.3e-06 | 27.3 | 0.12 | 860.0 | -0.6 |
| pfu_aug2.0_68.1_26783.t1 | 2 | 2 | TPT | 57 | 196 | 2.3e-06 | 27.3 | 3.2e-10 | 2.3e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26783.t1 | gi|524891711|ref|XP_005102388.1| | PREDICTED: putative UDP-sugar transporter DDB_G0278631-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_68.1_26783.t1 | gi|676474657|ref|XP_009060215.1| | hypothetical protein LOTGIDRAFT_229077 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_68.1_26783.t1 | gi|156392859|ref|XP_001636265.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_68.1_26783.t1 | gi|675888108|ref|XP_009029556.1| | hypothetical protein HELRODRAFT_122800, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_68.1_26783.t1 | gi|357466545|ref|XP_003603557.1| | UDP-sugar transporter sqv-7 [Medicago truncatula] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26783.t1 atgtatggagtcctaaagcgttgctctcccttgtttacccttgctctccttgttatagtattaaagaaaccagtgccatc gactcaaacaatcatgtctgtagtactactggtatctggatgtatcatagcaggttacggagacttaaagtttaactgga cagcttacacttgtggaatgctcagtaatatattccagtctttatacctactgctggtccagaaattctcagagaaggac ataagtaccgtagaaacattacagctcaacagtgtcaataccttacctttcttaacgttatacttgattggtagtgggga actttcacatgtgcttgattttgataaaagcaaaagtttctcgttttatgtgatatttgtgttgacaatcagtatgggtt gtgtaatgaattattctctgtttctgtgtactacatggacttcagctctgactacgggtgttgtcgggggaatgaaggct acgttacagaccatatttggaatgttcacatttggcggagttagccataatacggcaacatattcagggatcttcatgaa tcttggtggagggatctggtacatctatgcaaaatacatagaaaataagaggaaatcaactcaaggtcaaacaatgaaga aggttatgagtttatctacagctgaagatttccgagcattgtctagcggtgaaatgtcaaagattgcttgcaacggagtg tcgtcaaaaaggaacggagatctacatacaatacatgaagaggaccattcaaatccacagagcccatcccaccacatagt tacatttgagaatgagaaaagatga |
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Protein
| Protein ID | pfu_aug2.0_68.1_26783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26783.t1 MYGVLKRCSPLFTLALLVIVLKKPVPSTQTIMSVVLLVSGCIIAGYGDLKFNWTAYTCGMLSNIFQSLYLLLVQKFSEKD ISTVETLQLNSVNTLPFLTLYLIGSGELSHVLDFDKSKSFSFYVIFVLTISMGCVMNYSLFLCTTWTSALTTGVVGGMKA TLQTIFGMFTFGGVSHNTATYSGIFMNLGGGIWYIYAKYIENKRKSTQGQTMKKVMSLSTAEDFRALSSGEMSKIACNGV SSKRNGDLHTIHEEDHSNPQSPSHHIVTFENEKR |
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