Gene
| Gene Model ID | pfu_aug2.0_68.1_26784 |
|---|---|
| Locus | scaffold68.1 : 256006 ... 273829 : - |
| To GenomeBrowser | scaffold68.1:256006..273829 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_19819.1_11265 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26784.t1 | 2 | 1 | Na_H_Exchanger | 145 | 261 | 4.4e-24 | 84.7 | 3.0e-09 | 4.4e-05 | 22.1 |
| pfu_aug2.0_68.1_26784.t1 | 2 | 2 | Na_H_Exchanger | 380 | 658 | 4.4e-24 | 84.7 | 3.1e-23 | 4.7e-19 | 68.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26784.t1 | gi|524914997|ref|XP_005112307.1| | PREDICTED: mitochondrial sodium/hydrogen exchanger 9B2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_68.1_26784.t1 | gi|524914995|ref|XP_005112306.1| | PREDICTED: mitochondrial sodium/hydrogen exchanger 9B2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_68.1_26784.t1 | gi|676474660|ref|XP_009060216.1| | hypothetical protein LOTGIDRAFT_210172 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_68.1_26784.t1 | gi|390360654|ref|XP_788992.3| | 0.0 | |
| pfu_aug2.0_68.1_26784.t1 | gi|390341736|ref|XP_799202.3| | PREDICTED: mitochondrial sodium/hydrogen exchanger 9B2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26784.t1 atgtcagacagtgaggaacatgaagtgaatggcaagcagaacatgaacggttccaggagcatgttaccgcaggacgaggg aacagagcagtcacaagatgaagatgtaaatgtcaccgtggaaatacaagaccatgttcatcacaaacgctgccgtgctc tctgtatctgctgtcatgcttgctgtaagccatgtcgtaccaagtaccatccactcccgcctaaagcaagcatattccag cggctcaagtttgccttcatgtgtcctcctcatgcaagcatattccagcggctcaagtttgccctcatgtgtcctcctca tggtaacatagccatgtatatccagtttgttgtgctgatggctatgagttgggcagtgctggtcgctctcacccaagaga atgctatgccaggcggaaatctctttgctctcatagtgctgtttgctggctctgttataggaggctacatcttctcctta atacgtttaccacctcttcttggtatgttaattgtgggagccatgttgagaaacattccccatgtaaaggaggcagtagg ggaggcgatagaaccatcttggtctggagctctaagacagatagcattgacagtgatattgatcagggctggcctggggc tggatccagtggcactaaagaagctttccttcactgtgttacgtctagccttcactccatgccttacagaatgtgtggcc tcagctattgcctctcatttcctcctagacctgccttgggaatgggccttcatgctcggaatgtatggcctcagctgttg cctcgcatgccttgggaatgggccttcatgctcgggtgagctcatgttacatttgtatgtgttaggtcttgccttcactc catgccttagagaatgtgtggcctcagctattgcctcacatgccttgggaatgggctttcatgctcgggtcttgtcttca ctccatgccttagaaaatgtgtggcctcagctattgcctcacatgccttgggaatggaccttcatgctcggtaggaggat accgtggacgtccttggtacccgcgtccttatacctcccagggagccaggctttatcagtgtcaggagatttatattgta tggactcctatcatctagtcgttaatctcggttttgttctggcagcagtttctcccgctgttgttgttccctcgttgctg aatctgtctgatcgtggatacggcttggacaaaggagtgcccacgttagtgatcgccgcggcgagcgtggacgatgtcct cgcaatcacggggttcggtgtggtacttggaatcaccttttccactggtgatctggcggtgtccattatcaaaggtccct tagaagccttgctgggtgttacttatggaattgtatttggtatgttcctgtggtacttccccaatgttaaaagtaacaac cttgtattttaccgttcgttgttgctatttgccgggggactgatggccacgtttggtagtacggctgtccatctgtcagg ggccggtcccctgggatgtctgactgtagcatttgtagcagcctacaagtggagaaagcaaaggaaggagggagaacctg atgccatggcagaggtagtagccattttatggatgttgttccagccactactgtttgctctcattggttccgctgtagac atagaaaagtccctacaaggagatactgttggcttaggtatagctacactagctataggacttgtagtaaggattatcgt gactttcctggtagtctttggtgctggattgtccatcaaagagcagttctttgtagcattagcttggttccctaaggcta cagtacaggctgctataggaggtctggcgttagacctgaccatcaagaacaacgccaatcatttgatggattacggcaga caggttctgactatcgcagtgctctccatcattattactgcccccattggtgctatcgccatcgctctgtctgggccgcg gctacttaataaagtggataaggaggggaaggttgtgatgcagaactcaacagatcccgagaggacgtccatgttagatg acaggcaggaggaaaaaacggagatgaatcagctgtga |
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Protein
| Protein ID | pfu_aug2.0_68.1_26784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26784.t1 MSDSEEHEVNGKQNMNGSRSMLPQDEGTEQSQDEDVNVTVEIQDHVHHKRCRALCICCHACCKPCRTKYHPLPPKASIFQ RLKFAFMCPPHASIFQRLKFALMCPPHGNIAMYIQFVVLMAMSWAVLVALTQENAMPGGNLFALIVLFAGSVIGGYIFSL IRLPPLLGMLIVGAMLRNIPHVKEAVGEAIEPSWSGALRQIALTVILIRAGLGLDPVALKKLSFTVLRLAFTPCLTECVA SAIASHFLLDLPWEWAFMLGMYGLSCCLACLGNGPSCSGELMLHLYVLGLAFTPCLRECVASAIASHALGMGFHARVLSS LHALENVWPQLLPHMPWEWTFMLGRRIPWTSLVPASLYLPGSQALSVSGDLYCMDSYHLVVNLGFVLAAVSPAVVVPSLL NLSDRGYGLDKGVPTLVIAAASVDDVLAITGFGVVLGITFSTGDLAVSIIKGPLEALLGVTYGIVFGMFLWYFPNVKSNN LVFYRSLLLFAGGLMATFGSTAVHLSGAGPLGCLTVAFVAAYKWRKQRKEGEPDAMAEVVAILWMLFQPLLFALIGSAVD IEKSLQGDTVGLGIATLAIGLVVRIIVTFLVVFGAGLSIKEQFFVALAWFPKATVQAAIGGLALDLTIKNNANHLMDYGR QVLTIAVLSIIITAPIGAIAIALSGPRLLNKVDKEGKVVMQNSTDPERTSMLDDRQEEKTEMNQL |
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