Gene
| Gene Model ID | pfu_aug2.0_68.1_26785 |
|---|---|
| Locus | scaffold68.1 : 277520 ... 288810 : + |
| To GenomeBrowser | scaffold68.1:277520..288810 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_823.1_07714 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26785.t1 | 2 | 1 | ubiquitin | 7 | 73 | 6.8e-16 | 57.4 | 1.1e-18 | 3.2e-15 | 55.2 |
| pfu_aug2.0_68.1_26785.t1 | 4 | 1 | Ubiquitin_2 | 10 | 68 | 9.5e-07 | 28.9 | 3.7e-08 | 0.00011 | 22.3 |
| pfu_aug2.0_68.1_26785.t1 | 4 | 2 | Ubiquitin_2 | 172 | 183 | 9.5e-07 | 28.9 | 5.0 | 15000.0 | -4.3 |
| pfu_aug2.0_68.1_26785.t1 | 4 | 3 | Ubiquitin_2 | 250 | 282 | 9.5e-07 | 28.9 | 0.0028 | 8.4 | 6.7 |
| pfu_aug2.0_68.1_26785.t1 | 2 | 2 | ubiquitin | 251 | 261 | 6.8e-16 | 57.4 | 1.3 | 3800.0 | -2.7 |
| pfu_aug2.0_68.1_26785.t1 | 4 | 4 | Ubiquitin_2 | 407 | 420 | 9.5e-07 | 28.9 | 2.3 | 6800.0 | -2.6 |
| pfu_aug2.0_68.1_26785.t1 | 1 | 1 | zf-AN1 | 553 | 593 | 1.5e-12 | 47.1 | 1.2e-15 | 3.5e-12 | 45.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26785.t1 | gi|671007078|ref|XP_008694404.1| | PREDICTED: AN1-type zinc finger protein 4 isoform X1 [Ursus maritimus] | 0.0 |
| pfu_aug2.0_68.1_26785.t1 | gi|573885542|ref|XP_006630644.1| | PREDICTED: AN1-type zinc finger protein 4-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_68.1_26785.t1 | gi|585662073|ref|XP_006816684.1| | PREDICTED: AN1-type zinc finger protein 4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_68.1_26785.t1 | gi|478516671|ref|XP_004432570.1| | PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger protein 4 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_68.1_26785.t1 | gi|156376682|ref|XP_001630488.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26785.t1 atggaattatacatcgagacgcttacgggcactttcttcgagttgagggtatcaccttttgagaccatcatgtctgtaaa agcaaagatccaaaggcttgaaggaatcccaatagctcaacaacatctgatatggcagtcaatggaactagaggatgatt actgcctccatgactacagtatccatgatggtgccacactaaaactagtcctggccatgagaggtgggccaattaacact ggaagaatacccatggaggatcccactctcagagaaatggccgagtatgtggaggccaacagagacgagatctgggagaa agtaccgggcaatcgtcaggtcacgcttctagtgtttcgtgaaggagaccagctcaactttttcagagtggtagataggg gagatggtactctaactccactctcagagtcactcagtggtgcttcaatgtataatttcaatgacgaggaggaggaagag gaggctcctccaaaagagaaagtagaggagaacgaacaactcaaggaaaaaatgaagttgttacggggaaagatggaaca acttcacattagtaaaaagcccaaaaggaagattccccatcccccctcctcagaacattccagtagttctcataccacac gacgtcgacagcttcccggctcgggaagaaccataggtcaccaccttaacagaaacttttgtttgcctcctgttgggggg catagatcttccttctcccgtgaggacaggagtactatcacggagttaaaggaagatctaagtgtaaatgtggggggtag tggcttccagcaggatctctcagctactgcagtggagcataataatagtcatagtgccaaatcaagtatctctcgcgggc gacagatagacagtcttggtacctcagaacttagtgctagtcgcctcggacatgttttatctagtgttaaggaagacaca gtaactaggaaggaatcagaagtggaggtagggaggagaagcagtgagttacgatcagcccaaagagaaagagacaaact gaaaagtgctgaagggagtttaactcctgaagagattgccgcaaagacgcttaaagacattcagaaactggctagcctac atgaaaccatggcagccaaaaggaaagatacgtcatctgtagatttaaaggaaactctacgacctccaacatcatctaaa aataaacagaagttaaaaaacaatgaagtgactatagacaatctaaaagaagtgctatctcaccccaccacttcttctag agatatatctatagataacctgccagacacgtacggaaggccaactacttcatcacgatataaaggccttgagcggagaa aagagtttactttggaaagtttaagcacaagtgaagccaaagcaatgtctggaatattaaggcaggcttccttagaaaaa attggttcctctagaatagggaattttagtcccagcaaatctcgccttggaaattatactctaggaaatggcagtcaaga tggtagaattattacacctgagggaagattaatgtctgcaaggttacagcgtgttgccagcagtagagaagggagattac tctcaccatcccatagattacctcccgtcaaatcaaaaaagaaagcctccaagaggtgctttgtttgtggcaagaaaact gggcttgccaccagctatatatgcaggtgcggtaacaatttttgtgccagccatcggtacgcagaatcacatgactgtac gtttgactacaaaacagagggaaggaaacttctagagcagagtaatccagtggtcagtgctcctaaattacccaaaatct aa |
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Protein
| Protein ID | pfu_aug2.0_68.1_26785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26785.t1 MELYIETLTGTFFELRVSPFETIMSVKAKIQRLEGIPIAQQHLIWQSMELEDDYCLHDYSIHDGATLKLVLAMRGGPINT GRIPMEDPTLREMAEYVEANRDEIWEKVPGNRQVTLLVFREGDQLNFFRVVDRGDGTLTPLSESLSGASMYNFNDEEEEE EAPPKEKVEENEQLKEKMKLLRGKMEQLHISKKPKRKIPHPPSSEHSSSSHTTRRRQLPGSGRTIGHHLNRNFCLPPVGG HRSSFSREDRSTITELKEDLSVNVGGSGFQQDLSATAVEHNNSHSAKSSISRGRQIDSLGTSELSASRLGHVLSSVKEDT VTRKESEVEVGRRSSELRSAQRERDKLKSAEGSLTPEEIAAKTLKDIQKLASLHETMAAKRKDTSSVDLKETLRPPTSSK NKQKLKNNEVTIDNLKEVLSHPTTSSRDISIDNLPDTYGRPTTSSRYKGLERRKEFTLESLSTSEAKAMSGILRQASLEK IGSSRIGNFSPSKSRLGNYTLGNGSQDGRIITPEGRLMSARLQRVASSREGRLLSPSHRLPPVKSKKKASKRCFVCGKKT GLATSYICRCGNNFCASHRYAESHDCTFDYKTEGRKLLEQSNPVVSAPKLPKI |
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