Gene
| Gene Model ID | pfu_aug2.0_68.1_26787 |
|---|---|
| Locus | scaffold68.1 : 309040 ... 328117 : + |
| To GenomeBrowser | scaffold68.1:309040..328117 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_6804.1_60110 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26787.t1 | 1 | 1 | Myosin_head | 10 | 691 | 0.0 | 712.9 | 0.0 | 0.0 | 712.6 |
| pfu_aug2.0_68.1_26787.t1 | 2 | 1 | SH2 | 202 | 228 | 1.1e-17 | 63.6 | 1.8 | 3800.0 | -2.3 |
| pfu_aug2.0_68.1_26787.t1 | 2 | 2 | SH2 | 872 | 947 | 1.1e-17 | 63.6 | 2.0e-20 | 4.3e-17 | 61.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26787.t1 | gi|524869730|ref|XP_005091656.1| | PREDICTED: myosin-IIIb-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_68.1_26787.t1 | gi|742130983|ref|XP_010876252.1| | PREDICTED: unconventional myosin-IXb-like isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_68.1_26787.t1 | gi|632959014|ref|XP_007895376.1| | PREDICTED: myosin-IIIb-like isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_68.1_26787.t1 | gi|632959012|ref|XP_007895375.1| | PREDICTED: myosin-IIIb-like isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26787.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26787.t1 atggatgccgcaccccccgggaaaacggcggatctggccactttggctaacctggacgataaagtgctactgaacgaact gaaaattcgatactcaaacaacaacatatacacatacgtaggagatatccttattgccatcaatccatttaaagatctgg gaatatatgatgcagagtatggtcagaagtacttccttgagaacaagagttctaatccaccacatatatttgccattgct gactccacataccaatgcatggtgggatacggtggaagaatacccacaaatcaatgtgtccttatcagtggtgagagtgg tgctgggaagacggagagcacaaagctgatcatcaaacagctgatagatctatgtcacggtaatactcagctagaacaac agattttacaggtcaacccactactggaagcatttggtaacgcacaaactgctatgaacgataactctagcagattcgga aaatatattcagttggtgttccaggaggggcaagtgatgggagcaaagatttccgagtatctattggagaaatccagagt ggtacgacaaaacaaggaggaagaaagctttcacatattctactatatgtttgccgggctgaacaaagaaaaccttcaaa aatatcatctatattctgcagagaagcacagatatcttacaaatggtgcatcatgtcttcgacgagaaccaaaggcatta aagaagcgttacgaggacctactaaatgccatggatttagtaggatttacagatgaggagcagtatgacatgtttaacat gattgctgctgtgttacacatgggtaacgtgacctttagtgacgatgacaatgacgcggcttatgtggaagatgacaatg gagctgtcaaatatgcagctacactgcttggcattgggtcagaggaactgattggtactttgacttccatggtaacttac accagaggtgaacaagtcaagaggaattacacttcacaacaatcggaagatgcccgcgatgccatgagtaagacggtata tggccgtttatttggatggattgttaacaaagtaaaccaacttctagctcccagaatcctggaaggctctcagtcagaac aaagggaaataggtattcttgacatctttggttttgagcattttgagaagaatagttttgagcaagcttgtataaactta gccaatgaacagcttcagttctttttcaatcagcatgtattcaaacttgaacaagaggagtacgtcagagagggcattga ctggaaggagatcaagtttgtagacaatcagccgttactgaacttgttccttaacaaacctataggaattctgtcactgc tagatgaagagagtctgttccctaggggaacagatatttcctttgtggagaaattaaacatacattttaaagggaacaca tactatggaaaatctgctcaaactactgcaaaattcacaattagtcactacgcaggaaaggttacttatgattctggtgg atggttagaaaagaaccgagataccttacctccaggcttgatggaaatgttacaacatagcactaacgctcttgtcaaac tcattttcagagcacaagtaacaaggacgggcagtttggctctacaagccagaaagtcaaccagccgtcgcaccaggcgt agtaagaaaccagctgtaggtctagaggatggtagaaagaggaaacagaccgtaggtggacagttcaaaaattctctaaa cattttgatggagagaatgacctcatcggatcccgtgttcgtacgatgtctaaaaccaaaccatgtgaaggcacctggca agtttgatgaaaaatacataaaagatcagttactgtacacaggaatgttagagacaacaaagatcaggagagaagggttc gctgtaagaccatcatttccagaatttgttgagaagtataagataatagtgtgccaatcaagtctaccaggaaccaaaga aaattgtgtcaagatactcaaagccagcaaaattcaaggatggcaagtcggaaaaaccaaagtcttcctgaaatattacc acatagagcaacttgctgatatttttcaaaaaatgggtgtgtcagctatcaaaatacaaaaagttataaggggctttctt ggaagatgcaagtacagaaaacgtctagaagttgcaaggaaagaggctgaacgagtcagacatctactgtccgatatcaa ggacaaagcggtgcatcttgggaatgagctattaatagccaaggagaatgacaagaagatacccgaaagtttctttggta agggagatgactatggtttgccccctgtaccggactttcctggtagctttacaccacagctgactgtgagaagctatgaa caacctgcacaaccgaaatccagggaaatgggtatccaggctcaaacagagagtggctcagagtcagaattttctgatga tgaattcaaacctatctcctcaaacaagttcggtaaacctggcaccaagggagcaacaatacgatggttcaaggaaacac aaacggctcaggtttacgaccctgttaatgtggaaggaaattttatagccgagtggttccatggtgtgattagtcgaagg gaatcagaaacattactgaaaacaaaaccgaaagggatgtacttaattcgagtcagtgaaagtcgatttggatacacact gtctttcagtggtggggatcgcaccagacattacatgatagaccaactacccaacaaaaagtacatcgttattggagaac ccaaagtccataggacattaaaggatctggttgactatcacaaaaaggagaaaatctcaaattgggatgggctattatca gagccatgtggtcaggaaacaggaaattgtgattatcaggaattattaggagatgatttctattttactctggaacagaa agagaggatggcctctaaggcaggtaggcccctccctaatcgcccgagggagagtaatccacctcccctccccaacagga actactccgtagccagtacagtaaccagaccagacaacacagtggtaggaaggccgctccccgagagaccaggtcaagga gtatataataggctactacttaatcagcaaaaacaacaaaagtga |
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Protein
| Protein ID | pfu_aug2.0_68.1_26787.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26787.t1 MDAAPPGKTADLATLANLDDKVLLNELKIRYSNNNIYTYVGDILIAINPFKDLGIYDAEYGQKYFLENKSSNPPHIFAIA DSTYQCMVGYGGRIPTNQCVLISGESGAGKTESTKLIIKQLIDLCHGNTQLEQQILQVNPLLEAFGNAQTAMNDNSSRFG KYIQLVFQEGQVMGAKISEYLLEKSRVVRQNKEEESFHIFYYMFAGLNKENLQKYHLYSAEKHRYLTNGASCLRREPKAL KKRYEDLLNAMDLVGFTDEEQYDMFNMIAAVLHMGNVTFSDDDNDAAYVEDDNGAVKYAATLLGIGSEELIGTLTSMVTY TRGEQVKRNYTSQQSEDARDAMSKTVYGRLFGWIVNKVNQLLAPRILEGSQSEQREIGILDIFGFEHFEKNSFEQACINL ANEQLQFFFNQHVFKLEQEEYVREGIDWKEIKFVDNQPLLNLFLNKPIGILSLLDEESLFPRGTDISFVEKLNIHFKGNT YYGKSAQTTAKFTISHYAGKVTYDSGGWLEKNRDTLPPGLMEMLQHSTNALVKLIFRAQVTRTGSLALQARKSTSRRTRR SKKPAVGLEDGRKRKQTVGGQFKNSLNILMERMTSSDPVFVRCLKPNHVKAPGKFDEKYIKDQLLYTGMLETTKIRREGF AVRPSFPEFVEKYKIIVCQSSLPGTKENCVKILKASKIQGWQVGKTKVFLKYYHIEQLADIFQKMGVSAIKIQKVIRGFL GRCKYRKRLEVARKEAERVRHLLSDIKDKAVHLGNELLIAKENDKKIPESFFGKGDDYGLPPVPDFPGSFTPQLTVRSYE QPAQPKSREMGIQAQTESGSESEFSDDEFKPISSNKFGKPGTKGATIRWFKETQTAQVYDPVNVEGNFIAEWFHGVISRR ESETLLKTKPKGMYLIRVSESRFGYTLSFSGGDRTRHYMIDQLPNKKYIVIGEPKVHRTLKDLVDYHKKEKISNWDGLLS EPCGQETGNCDYQELLGDDFYFTLEQKERMASKAGRPLPNRPRESNPPPLPNRNYSVASTVTRPDNTVVGRPLPERPGQG VYNRLLLNQQKQQK |
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