Gene
| Gene Model ID | pfu_aug2.0_68.1_26793 |
|---|---|
| Locus | scaffold68.1 : 418250 ... 430179 : + |
| To GenomeBrowser | scaffold68.1:418250..430179 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_10304.1_10115 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26793.t1 | 2 | 1 | Ion_trans | 210 | 246 | 3.3e-07 | 29.7 | 0.17 | 500.0 | -0.3 |
| pfu_aug2.0_68.1_26793.t1 | 2 | 2 | Ion_trans | 267 | 431 | 3.3e-07 | 29.7 | 1.3e-10 | 3.7e-07 | 29.5 |
| pfu_aug2.0_68.1_26793.t1 | 1 | 1 | cNMP_binding | 533 | 624 | 2.9e-17 | 62.2 | 1.8e-20 | 5.4e-17 | 61.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26793.t1 | gi|676460363|ref|XP_009055598.1| | hypothetical protein LOTGIDRAFT_177303 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_68.1_26793.t1 | gi|585723336|ref|XP_006813621.1| | PREDICTED: cyclic nucleotide-gated olfactory channel-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_68.1_26793.t1 | gi|699664760|ref|XP_009883316.1| | PREDICTED: cGMP-gated cation channel alpha-1 [Charadrius vociferus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26793.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26793.t1 atgcctttatcaaagacaaaggttgctcccgaaaatgaaaatacgagcaaaccgaaacatgagaataagaaaacttcgga ggaaaccaaaaccgacaagaatgatgctaataaaaaggaggacacaaagaaagcaccgactttggcggacaaaaagatgg gaggaaaatggaagacagcaattgatgaggctcgcaaagaatcaagatttgcaaggctagctcgcaaagaatcaagattt gcaaggctagtagcaacgtcatttttagagtgtcctgcgttacggaatagcgttgtacaaaaaggaagtcagaattggag agacgggcgtcgaatgcgaagcaagatgactgtaatgaaaaactctcttactaatgaactgtgtgatgcgtatggtgaaa tggtgatagcacaatttaccttttttgcaaagatgggatacaattccaacgctgcagaaaaatcccctgccagcaaaaaa ttaacaagaattgtaaacgcacaacaacaagctaagaagttccgaaaagcaagtttaaaggagccagatccgtttttgga gagattcactgtggttagtagggcacatacaatagaagaggtcaactggtatttcaaagatttattcacaagaaagtttt ggaaggaggttgtccttgacccagcggaggccggatattattggtggtcattcattgcatgtgtgtccgtgatgtacaac ttgatagtggtcatcatgagggcgtcgttctacgaccaactaaatataccggaattcatgaagtactggtttatctttga ttacatatgtgatggagtttacatctttgacatgttcatcaaaagcagaatagacatcattgctataattccattagatt ttttatatcttgcggttggtttcgaagcattgctgagactcaacaaatgcttaaaagtatggcgtgtaggagaattcttc cagctcgcagaaactcatacaaattttcctaatttactacgcgtcatcaaccttatcctgatcatcattgtcattataca ctggaatggttgtatatatttctccatcagcagagctctaggttttggttcagatggctgggcataccccgatacaaccc aagatacgttttcagactttctgatgatgtatgtgtacagttactactggtcgtgtttgacgttaacaacaattggtgat actccttatccagaacatgcattagaattcacatattgtattgtttgcagtttaatgggagtgcttatatttgctacaat ttttggaaatgtcggatctcttattaacgagatggacgctgcaagaaacgagtttcaacataaggtggacgctgtaaaac gctacatggaaataagacaagtcagcagttcattgcaggaacgagttgtgaagtggtttgactacacatggaacaacaaa cagtcagtcgatgacaaagcagctcttgaatttctgcctgaaaaattaaaagcagagattgctatacatgtgcatcttca gactctacgaagagtagaattattcaaagattgtgaacctggtctgttgactgagctagtattgaagcttaaattacaag ttttcagtccaggggattacatctgtcgaaaaggggatattggaaaagaaatgtacattataaagcgcggaaagctacag gttgtgtcagaagacggcaagaaaatatttgtgactctgggagctggtgccgtatttggcgagatcagtatcctgaatat cccaggaaacaaaaccggaaacagacgaacagcaagtgttcggagcgttggatattccgatttgttttgtctcagtaaat tagaccttcttgatgccctcacagaatatccggatgccagaaaaatgctcaacgaaataggaaagcagaaattagtgaag gatggtctcatagacgaggaagctgccagaagagaagaaaggaagcaacagaacctagacaagaagatagaacttattgc tgatgcggtagatgaccttcacaatgaggtcaaacgtttgatcgaaaagataagcaagaaaaaagaggagaaagagagta gtatgaaaaagaaatcagctgataaggttgatgtaagtacagaggaaccaaagaaagaggacgtgaaaaaagaacaacca aaggacgagaaagacgatactaaacaggccaaatcgactgtaacggtaaaggaagtcgtcccgaagaaagaagagggaat tgttgataaagatggaaaacaaaaagagggagaaaaacaagatacaataagcaaagaggaaaagaaggaggaaaagtag |
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Protein
| Protein ID | pfu_aug2.0_68.1_26793.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26793.t1 MPLSKTKVAPENENTSKPKHENKKTSEETKTDKNDANKKEDTKKAPTLADKKMGGKWKTAIDEARKESRFARLARKESRF ARLVATSFLECPALRNSVVQKGSQNWRDGRRMRSKMTVMKNSLTNELCDAYGEMVIAQFTFFAKMGYNSNAAEKSPASKK LTRIVNAQQQAKKFRKASLKEPDPFLERFTVVSRAHTIEEVNWYFKDLFTRKFWKEVVLDPAEAGYYWWSFIACVSVMYN LIVVIMRASFYDQLNIPEFMKYWFIFDYICDGVYIFDMFIKSRIDIIAIIPLDFLYLAVGFEALLRLNKCLKVWRVGEFF QLAETHTNFPNLLRVINLILIIIVIIHWNGCIYFSISRALGFGSDGWAYPDTTQDTFSDFLMMYVYSYYWSCLTLTTIGD TPYPEHALEFTYCIVCSLMGVLIFATIFGNVGSLINEMDAARNEFQHKVDAVKRYMEIRQVSSSLQERVVKWFDYTWNNK QSVDDKAALEFLPEKLKAEIAIHVHLQTLRRVELFKDCEPGLLTELVLKLKLQVFSPGDYICRKGDIGKEMYIIKRGKLQ VVSEDGKKIFVTLGAGAVFGEISILNIPGNKTGNRRTASVRSVGYSDLFCLSKLDLLDALTEYPDARKMLNEIGKQKLVK DGLIDEEAARREERKQQNLDKKIELIADAVDDLHNEVKRLIEKISKKKEEKESSMKKKSADKVDVSTEEPKKEDVKKEQP KDEKDDTKQAKSTVTVKEVVPKKEEGIVDKDGKQKEGEKQDTISKEEKKEEK |
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