Gene
| Gene Model ID | pfu_aug2.0_68.1_26794 |
|---|---|
| Locus | scaffold68.1 : 431900 ... 433759 : - |
| To GenomeBrowser | scaffold68.1:431900..433759 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_10304.1_10116 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26794.t1 | 1 | 1 | zf-MYND | 2 | 29 | 2.0e-11 | 43.5 | 4.8e-15 | 3.6e-11 | 42.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26794.t1 | gi|676460366|ref|XP_009055599.1| | hypothetical protein LOTGIDRAFT_228668 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_68.1_26794.t1 | gi|390357051|ref|XP_003728916.1| | 8.0e-37 | |
| pfu_aug2.0_68.1_26794.t1 | gi|291224840|ref|XP_002732413.1| | PREDICTED: uncharacterized protein LOC100366649 [Saccoglossus kowalevskii] | 2.0e-35 |
| pfu_aug2.0_68.1_26794.t1 | gi|557003850|ref|XP_006003945.1| | PREDICTED: uncharacterized protein LOC102350019 [Latimeria chalumnae] | 1.0e-29 |
| pfu_aug2.0_68.1_26794.t1 | gi|390359071|ref|XP_003729404.1| | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26794.t1 atgaaacgatgtacaaggtgtaaaaaggttttctattgttccaggcagtgtcaaatcaaagactggccagatcacaaagt agattgtggaaagaaattcccagaaacaacaccatacacaagatctttgataaatgataaatttacaactgatgatggat ccatatttggcacagataattcccaaacaaaaacaaatgaggaacccattgttggaagggaaagttcctcagaaacaccg acatcaggcattattgatttcaagagagctgccctttctttgaagacaaataataaagacacatgtgaaagttcagggac aacatctaaaaaataccttcaacatggaaaatttcaaaatgatgttccagtaattgatgtctcaaagccacatgtggaaa tagtggtgaaagcaaataaagagaaacataagattctaattcaaaatgactggactggacaagaaattcttaaaaatctg agtttcaatttgaaaattccattggacaagatcaagattattcataaaggaaagttcatgacccaagaaaccatccaatc tcatgtctccaacaaagctgtttttcaagtgattggtgaacaggcagccaatgaagatggtcttgatgttagggacatcg aactgatgatgaagcaactcggtgtcggaaggaatgacgctgtgatagcactgagaaagcatggtgatataatagatgcc atgttacagttaggcagcaaataa |
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Protein
| Protein ID | pfu_aug2.0_68.1_26794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26794.t1 MKRCTRCKKVFYCSRQCQIKDWPDHKVDCGKKFPETTPYTRSLINDKFTTDDGSIFGTDNSQTKTNEEPIVGRESSSETP TSGIIDFKRAALSLKTNNKDTCESSGTTSKKYLQHGKFQNDVPVIDVSKPHVEIVVKANKEKHKILIQNDWTGQEILKNL SFNLKIPLDKIKIIHKGKFMTQETIQSHVSNKAVFQVIGEQAANEDGLDVRDIELMMKQLGVGRNDAVIALRKHGDIIDA MLQLGSK |
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