Gene
| Gene Model ID | pfu_aug2.0_68.1_26800 |
|---|---|
| Locus | scaffold68.1 : 509277 ... 535035 : - |
| To GenomeBrowser | scaffold68.1:509277..535035 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_2464.1_51676 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26800.t1 | 7 | 1 | Cadherin | 35 | 77 | 0.0 | 258.8 | 1.5 | 4600.0 | -2.1 |
| pfu_aug2.0_68.1_26800.t1 | 7 | 2 | Cadherin | 128 | 222 | 0.0 | 258.8 | 5.9e-17 | 1.7e-13 | 50.5 |
| pfu_aug2.0_68.1_26800.t1 | 7 | 3 | Cadherin | 237 | 330 | 0.0 | 258.8 | 2.5e-13 | 7.4e-10 | 38.9 |
| pfu_aug2.0_68.1_26800.t1 | 7 | 4 | Cadherin | 354 | 443 | 0.0 | 258.8 | 8.7e-10 | 2.6e-06 | 27.5 |
| pfu_aug2.0_68.1_26800.t1 | 7 | 5 | Cadherin | 457 | 546 | 0.0 | 258.8 | 4.3e-20 | 1.3e-16 | 60.6 |
| pfu_aug2.0_68.1_26800.t1 | 7 | 6 | Cadherin | 565 | 651 | 0.0 | 258.8 | 8.3e-16 | 2.5e-12 | 46.8 |
| pfu_aug2.0_68.1_26800.t1 | 7 | 7 | Cadherin | 677 | 760 | 0.0 | 258.8 | 3.4e-14 | 9.9e-11 | 41.7 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26800.t1 atggaaaaagttaaaacagttctattagtgctggtatgtaccgctctcgtatcagtttgtagcgctgtggtaacgtacgc agtggacgaagagagagctccgaacgtcattataggcaacatcatgacggtcattgacgaggatccccaagtgaccgacg atatgatccgggacatgcgcttcgccctactttcggacagtcagcacgtggacaagttcgcggtggaagagagggaagaa atatgtccgtttcgagtgatatgtaaagtccgagtaaaagtgggtgccacaagtggttcctactacaggacagtgacggt ggatattttgatagaggacataaacgataacgctccgacgttcactaacgcttccatagcgctcagcatctcggagggat ctactctgaatagtaccttcccgattctcagcgcgagcgatcgagacatgggaccaaataattcgatcaaagaatatgta ctgattccaaacacgggaatgtttgctttagacatacatccgaagattgacggaacttccgatctaagtctccgtctgat tcagacactagaccgcgaggacaaggaccgttacacgatttacgtcaaggcgaaagatggcggcaatcccccgaaatcag gaacattgatcgtgaatatttcagtatcggacgtcaatgataatgcgccagttttcacacaggatctttacaacatcaca attcaagaggacataccattgaataccgttattacccgagtttcagcgaacgatgccgacaccgggaaaaatgcggaagt gacgtatcgattcagcgttcgccaaacggatgacatatctatctatggaatatcacagacatccggtgaaattagcgtca ttggtcaaccagagtacgagccaaacaaaccgttttatagaatcgtcgtggaggcatcggacagtgggactatagtgaga aaaagctcccaagtagaagtctttgtttacataaatgatacaaataacaatgctccgcaaataacgataaacttgctctc taatggtcaagattttgctgttattaaggagaacgctaacatcggtgacgtcacagcccacattgacgtcaaagacgagg atatgggcattaatggactcgtgaactgtacgttaaacaacaagtattttcgattgcaacaattatcgaatgtgtcaaac gaatataaagtcgtcgtgaaaagtgaaattgatcgagaagagaaaatcgaacacgtgattacaatacattgtcacgatgg cggcactccgtctttgaactcttcggcaagtttcattgttcaagttcaagatgaaaatgacaatgctccgacttttacca acagagtgtacgtggcacaaatagacgaaaataaaccagcacagagcatcgttgtcaaagtcagtgccacagaccctgac caaagtccgaatggtcaagtcaggtattacttgggtccggaagcccagtttgactttacaatcaatccaacagatggaat catacggacaaaaaccgtgttcgacagagaaatgcaaagtagtatcaatttcactgttttggctgtggatggcggaagtc cggttactctgaccggaactgcaactatacagctgcgcattaacgatgaaaacgacgtcacgccaactttcaataaatct cactgggagtttatcgttaaagaggagttaaatactacctcgataggattcataaaagcttacgacctggatgcagggga taatggaagaataacattttacatgaaaatcgaagacctggcacgagtaccttttgatataacgccgtatggagaaatcc atagaacggcacgtctagacagagaacagaaagacaggtatcagtttgacgtcattgctcgtgacaatggtgtacacacg aggagtaattccacacaagtgactgttataattgaagacgtcaatgacaatgcccctaagtttgtgtttcctgatgccta taacagtacagtgacgatactatacacggctttagagaatagcctggtcacaacgctttcggcaaccgatatagattacg ctgaaaatgccgagattacgtacggtattatcggtggtaacggtgatgggattttcaagattgataaattttcgggagag attttgctggctcggaaaatagggaagaacgagataaaaatttacgacctcatagtgactgccgaggacaatggtcttca agaacaaagactgacacgtcatcctctctctgtgcatgtcaaatttgttaacgtcacagctatttcgtcacttccggtag aggagcatccgcaaaatttgatcatcgccattgtgatagctgccttaacagtgataatttctgttgcaataatttcggtt atatgcatcatacgaaggattgacatgcgcaaacataattatcccgccaaaaatatagaagaaatgaagattatggagaa tatggcgagaaacaacagtaacagatcgtcatcctccaaagggtcacgtgaacaaatggtgccgtctgtgatttacaaaa acgggaagaaggaagtgagtttttccctcgatgaagatgatacaaacatttcttattccttcccctccacgttgtctgat acaaatcccagcatgatcacctttaaatccacaagtccactgactgtacagggtaaaaaattccccgaatcttccatgaa agaagacaatcacagtgatatgtcagaggaatctacaactggtgatagtggacgaggagggagtgaggaagatgtccgga acagcgggctgtcacatccatcagaatcaaccataggtatgcttgtctga |
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Protein
| Protein ID | pfu_aug2.0_68.1_26800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26800.t1 MEKVKTVLLVLVCTALVSVCSAVVTYAVDEERAPNVIIGNIMTVIDEDPQVTDDMIRDMRFALLSDSQHVDKFAVEEREE ICPFRVICKVRVKVGATSGSYYRTVTVDILIEDINDNAPTFTNASIALSISEGSTLNSTFPILSASDRDMGPNNSIKEYV LIPNTGMFALDIHPKIDGTSDLSLRLIQTLDREDKDRYTIYVKAKDGGNPPKSGTLIVNISVSDVNDNAPVFTQDLYNIT IQEDIPLNTVITRVSANDADTGKNAEVTYRFSVRQTDDISIYGISQTSGEISVIGQPEYEPNKPFYRIVVEASDSGTIVR KSSQVEVFVYINDTNNNAPQITINLLSNGQDFAVIKENANIGDVTAHIDVKDEDMGINGLVNCTLNNKYFRLQQLSNVSN EYKVVVKSEIDREEKIEHVITIHCHDGGTPSLNSSASFIVQVQDENDNAPTFTNRVYVAQIDENKPAQSIVVKVSATDPD QSPNGQVRYYLGPEAQFDFTINPTDGIIRTKTVFDREMQSSINFTVLAVDGGSPVTLTGTATIQLRINDENDVTPTFNKS HWEFIVKEELNTTSIGFIKAYDLDAGDNGRITFYMKIEDLARVPFDITPYGEIHRTARLDREQKDRYQFDVIARDNGVHT RSNSTQVTVIIEDVNDNAPKFVFPDAYNSTVTILYTALENSLVTTLSATDIDYAENAEITYGIIGGNGDGIFKIDKFSGE ILLARKIGKNEIKIYDLIVTAEDNGLQEQRLTRHPLSVHVKFVNVTAISSLPVEEHPQNLIIAIVIAALTVIISVAIISV ICIIRRIDMRKHNYPAKNIEEMKIMENMARNNSNRSSSSKGSREQMVPSVIYKNGKKEVSFSLDEDDTNISYSFPSTLSD TNPSMITFKSTSPLTVQGKKFPESSMKEDNHSDMSEESTTGDSGRGGSEEDVRNSGLSHPSESTIGMLV |
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