Gene
| Gene Model ID | pfu_aug2.0_680.1_01033 |
|---|---|
| Locus | scaffold680.1 : 23644 ... 25078 : + |
| To GenomeBrowser | scaffold680.1:23644..25078 |
| Genes list of scaffold | scaffold680.1 |
| Synonym | pfu_aug1.0_156673.1_06674 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_680.1_01033.t1 | 2 | 1 | RVT_1 | 3 | 39 | 1.2e-07 | 31.3 | 1.7e-05 | 0.25 | 10.6 |
| pfu_aug2.0_680.1_01033.t1 | 2 | 2 | RVT_1 | 64 | 126 | 1.2e-07 | 31.3 | 2.5e-08 | 0.00038 | 19.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_680.1_01033.t1 | gi|390359959|ref|XP_785760.3| | 2.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_680.1_01033.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01033.t1 atggaacagataatcagccacctagagaagcacaacatcctagcagacgaacagcatggtttcaggaagcggagatcctg cgagagccagctcatcaatacagtgcatgacgtcgccagtgaactcaacgccagacaacaaatcgatgctgttcagcttc ctgtccaacagaacacagcagaggccgatgtaacatcactgcaagaggacttggatcatcttcaagaatgggataaggaa tggatgatgtcctttaatcctgagaagtgcgaagtcatccgtatcaccaacaagcggcgtatcatccatggtgactacat catccatggacacacacttaaacatacagaccaagcaaagtacctgggcgtaaccattgacaccaaattatcctggggac ctcaacaaaacaacaaccttgcctttctaagaaggaacatcggaagctgtcctcgtaccatcagggagcagagttataaa actttggtccgtccacaggttgagtacgcatccacggtatgggttaacaagtctcagaggtccacagtagagagggtcca acgcagagctgcgcggttcatctgggaactactcaagggaaagcagtgttgcagcaatgttacagaacctgcatcttga |
|
Protein
| Protein ID | pfu_aug2.0_680.1_01033.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01033.t1 MEQIISHLEKHNILADEQHGFRKRRSCESQLINTVHDVASELNARQQIDAVQLPVQQNTAEADVTSLQEDLDHLQEWDKE WMMSFNPEKCEVIRITNKRRIIHGDYIIHGHTLKHTDQAKYLGVTIDTKLSWGPQQNNNLAFLRRNIGSCPRTIREQSYK TLVRPQVEYASTVWVNKSQRSTVERVQRRAARFIWELLKGKQCCSNVTEPAS |
|