Gene
| Gene Model ID | pfu_aug2.0_680.1_01034 |
|---|---|
| Locus | scaffold680.1 : 28717 ... 37533 : - |
| To GenomeBrowser | scaffold680.1:28717..37533 |
| Genes list of scaffold | scaffold680.1 |
| Synonym | pfu_aug1.0_10704.1_24778 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-h-like isoform x2 | GO:0000079 GO:0006355 GO:0016538 GO:0019901 GO:0070985 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_680.1_01034.t1 | 2 | 1 | Cyclin_N | 3 | 59 | 5.8e-07 | 29.1 | 1.5e-10 | 7.5e-07 | 28.7 |
| pfu_aug2.0_680.1_01034.t1 | 2 | 2 | Cyclin_N | 192 | 213 | 5.8e-07 | 29.1 | 0.64 | 3200.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_680.1_01034.t1 | gi|524881514|ref|XP_005097408.1| | PREDICTED: cyclin-H-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_680.1_01034.t1 | gi|524881512|ref|XP_005097407.1| | PREDICTED: cyclin-H-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_680.1_01034.t1 | gi|512904801|ref|XP_004925786.1| | PREDICTED: cyclin-H [Bombyx mori] | 0.0 |
| pfu_aug2.0_680.1_01034.t1 | gi|759065365|ref|XP_011342111.1| | PREDICTED: cyclin-H [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_680.1_01034.t1 | gi|746864610|ref|XP_011063310.1| | PREDICTED: cyclin-H [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_680.1_01034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01034.t1 atggactaccatccaaaggatatcatgttgacatgtgtctatctggcttgtaaagtagaggagtttaacgtgtcaatcgg acagtttgtcggtaatcttaaaggtgacagagaggtgtacgctaacactatactcagctttgaacttctgttaatggaca agttacattatcatctaaccgtacacaacccctacagacctctggagggattcttcatagatataaagacaagatcaatg gccgtggagaatgtggagagatatagaaaaggagcggatgagtttctggataaaacactatctacagatgcctgtcttat atttgcaccttctcagatagccctgtcagcaattgttgttagttcaaacaaggactcaaacttagaaagctatatttcag aaactctgttaaaagggcatccaaaagatgaaaagaaaaaatgtgcatatcaagtgaaaaaattaaaggctatggtgaaa tcactggaaccctatcagaagaatcagatgggagttatactgaagaagcttgaccactgccggaaccaagaaaacaaccc agagagtgaaatatacaaaagaaaactgcaagaaatgttggacgaagacgaggaaatacaaacgaggaaaagacagaaaa taagtgctaaagaaaaagcaagagagaaagagcttcttggaatatcttga |
|
Protein
| Protein ID | pfu_aug2.0_680.1_01034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01034.t1 MDYHPKDIMLTCVYLACKVEEFNVSIGQFVGNLKGDREVYANTILSFELLLMDKLHYHLTVHNPYRPLEGFFIDIKTRSM AVENVERYRKGADEFLDKTLSTDACLIFAPSQIALSAIVVSSNKDSNLESYISETLLKGHPKDEKKKCAYQVKKLKAMVK SLEPYQKNQMGVILKKLDHCRNQENNPESEIYKRKLQEMLDEDEEIQTRKRQKISAKEKAREKELLGIS |
|