Gene
| Gene Model ID | pfu_aug2.0_680.1_01043 |
|---|---|
| Locus | scaffold680.1 : 197974 ... 199391 : + |
| To GenomeBrowser | scaffold680.1:197974..199391 |
| Genes list of scaffold | scaffold680.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable g-protein coupled receptor 52-like | GO:0004871 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_680.1_01043.t1 | 2 | 1 | 7TM_GPCR_Srx | 21 | 50 | 2.1e-06 | 27.0 | 0.015 | 56.0 | 2.7 |
| pfu_aug2.0_680.1_01043.t1 | 1 | 1 | 7tm_1 | 38 | 294 | 6.3e-36 | 123.8 | 2.9e-39 | 1.1e-35 | 123.0 |
| pfu_aug2.0_680.1_01043.t1 | 2 | 2 | 7TM_GPCR_Srx | 60 | 252 | 2.1e-06 | 27.0 | 5.5e-10 | 2.1e-06 | 27.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_680.1_01043.t1 | gi|676465206|ref|XP_009057169.1| | hypothetical protein LOTGIDRAFT_162903 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_680.1_01043.t1 | gi|585703474|ref|XP_006823267.1| | PREDICTED: histamine H2 receptor-like [Saccoglossus kowalevskii] | 4.0e-33 |
| pfu_aug2.0_680.1_01043.t1 | gi|390363540|ref|XP_003730396.1| | PREDICTED: probable G-protein coupled receptor 21 [Strongylocentrotus purpuratus] | 2.0e-26 |
| pfu_aug2.0_680.1_01043.t1 | gi|585649278|ref|XP_006814359.1| | PREDICTED: probable G-protein coupled receptor 52-like [Saccoglossus kowalevskii] | 2.0e-24 |
| pfu_aug2.0_680.1_01043.t1 | gi|291230882|ref|XP_002735395.1| | PREDICTED: neuropeptide Y receptor-like [Saccoglossus kowalevskii] | 9.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_680.1_01043.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01043.t1 atggatgtaactaatttgacaaattcacagagaacggaaccctccagcgaatatgttaaaaatataaagtttgttttcat tttgatcatttcaatcttgatcatcgtaaataatgtgataaacatttcggtggtttggaagacgatacagttacccagga taaccagaatttgcttgttgaacctgagcttcagtgacctattggtaggactggtgtcgtgcgccccatgtgtggtaccc gttctcataggacgatggccgtatggagctatttggtgtcagattgcaggtataatacatggcacttctgtaaccatctc tatttggagtttatcactgatcagcattgacaggtatttagccattatcaaaccattgcattccagggtcattctgacga cgaagagaacatttggagttttggtatttttgtggattttggcagtattgaccttcttttcgcctctaccaacgaagtct gattttatatactatcagtacagtgtatatgagagtatgtgcggtttgtactgggaatataaatggttttgtgtcattac ggcggtctacattcccatcttatcaggctttatattagtgttcaccaacgttaaggtcatgaggaaaattgtatcaagaa aatacaacgaaacgagacaagattgcctgaataagtcgtcagcatcctcgcggagatctaccgaaatcagggctgtcaaa ttactggtcctggcgtctgtggtttatttcattacttggggaccgtatgtgctacaggtggtaataacgagccttggaga tatcaggacagtgcctcactccgtacgctttgtaacgatgtggctagccaacagcaatagttttacaaacgtcttcgtct attctttcatgtacaaaagcttcagacgcagagtcaagtacttaattttgaagctgatatgttactcaaaattagagagt aggaatgcgtctgcagctgaacggcaggggggatctaggtctgctcatatgtcactgtctgagctcaaagcaagatacga ctga |
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Protein
| Protein ID | pfu_aug2.0_680.1_01043.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01043.t1 MDVTNLTNSQRTEPSSEYVKNIKFVFILIISILIIVNNVINISVVWKTIQLPRITRICLLNLSFSDLLVGLVSCAPCVVP VLIGRWPYGAIWCQIAGIIHGTSVTISIWSLSLISIDRYLAIIKPLHSRVILTTKRTFGVLVFLWILAVLTFFSPLPTKS DFIYYQYSVYESMCGLYWEYKWFCVITAVYIPILSGFILVFTNVKVMRKIVSRKYNETRQDCLNKSSASSRRSTEIRAVK LLVLASVVYFITWGPYVLQVVITSLGDIRTVPHSVRFVTMWLANSNSFTNVFVYSFMYKSFRRRVKYLILKLICYSKLES RNASAAERQGGSRSAHMSLSELKARYD |
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