Gene
Gene Model ID | pfu_aug2.0_680.1_01045 |
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Locus | scaffold680.1 : 213259 ... 233013 : - |
To GenomeBrowser | scaffold680.1:213259..233013 |
Genes list of scaffold | scaffold680.1 |
Synonym | pfu_aug1.0_9325.1_02743 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_680.1_01045.t1 | 3 | 1 | Herpes_UL45 | 6 | 157 | 9.3e-07 | 28.4 | 4.2e-07 | 0.0031 | 16.9 |
pfu_aug2.0_680.1_01045.t1 | 5 | 1 | Lectin_C | 45 | 155 | 9.0e-30 | 103.4 | 3.1e-15 | 2.3e-11 | 44.2 |
pfu_aug2.0_680.1_01045.t1 | 3 | 2 | Herpes_UL45 | 159 | 211 | 9.3e-07 | 28.4 | 0.00038 | 2.8 | 7.3 |
pfu_aug2.0_680.1_01045.t1 | 5 | 2 | Lectin_C | 186 | 250 | 9.0e-30 | 103.4 | 2.8e-09 | 2.1e-05 | 25.0 |
pfu_aug2.0_680.1_01045.t1 | 5 | 3 | Lectin_C | 261 | 326 | 9.0e-30 | 103.4 | 6.4e-07 | 0.0047 | 17.5 |
pfu_aug2.0_680.1_01045.t1 | 3 | 3 | Herpes_UL45 | 331 | 375 | 9.3e-07 | 28.4 | 0.0063 | 47.0 | 3.3 |
pfu_aug2.0_680.1_01045.t1 | 5 | 4 | Lectin_C | 338 | 355 | 9.0e-30 | 103.4 | 0.7 | 5200.0 | -1.9 |
pfu_aug2.0_680.1_01045.t1 | 5 | 5 | Lectin_C | 362 | 424 | 9.0e-30 | 103.4 | 5.3e-09 | 3.9e-05 | 24.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_680.1_01045.t1 | gi|676450733|ref|XP_009052475.1| | hypothetical protein LOTGIDRAFT_231745 [Lottia gigantea] | 3.0e-38 |
pfu_aug2.0_680.1_01045.t1 | gi|676487349|ref|XP_009064264.1| | hypothetical protein LOTGIDRAFT_131080, partial [Lottia gigantea] | 2.0e-27 |
pfu_aug2.0_680.1_01045.t1 | gi|524889813|ref|XP_005101458.1| | PREDICTED: macrophage mannose receptor 1-like [Aplysia californica] | 2.0e-16 |
Transcript
Transcript ID | pfu_aug2.0_680.1_01045.t1 |
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Definition | - |
>pfu_aug2.0_680.1_01045.t1 atgaaaaagtttgtttcaaccctcgttactgttctcctctttcatgtgcaaatagattacagctggtctgatcattgtcc aaatggaccatgggtcaatgtccagggaacttgttattacttcagcacacaaccactgacctataaggaatcattccaac aatgccaaaacctacagtcagatctgcttatattcttcggcgagcaagataggttggcctttgtgaataagactaaatca atgggtattacaacagaaagatggtggacctcgctgagcgacctgaatcatccggggacttggacatggggacagtcacc ggcagctgttaccgccttaggaaactctgtagtctggaatgtagaaccggatgattcggcacacattgagaattgtggag caatgaacattcaggggacgattagcgacgaaaaatgtggtgaaaaacatggatttatatgtgaacttcctacgtctgga ggctgtcccgatggctggatgagcaccgatacagcatgctacctgttcagtgacttctcagatccttatagctttaagac gtggaacaatgctaaagtttactgcagtaatgttattcagcaagcgggacctacagctcaccttatatacctggagacag ccaatgaactggcttacatacgaagacagctaccgggagttaatatgacgtcacaaatatggtggataggcatgaacgac aaacttcacgagaatgcatggcattggttggagtttgaatccagacgatggttaggtgtaccattttggagtggtctgaa tttcaaacaagatcaaaatttgtggtattggtcgacaggcctgtcagctaaccgcactttgattcattgggattctgaac caaatgattttgcggggagagaggattgtgcatttatcttccaggacggcacatttaatgactttccatgttttttacct gctgccgtagcatgtgagcttgattctgaagatgccccatgtccagctggctggacaccgtccttggacgaaggttcctc cagttgttattacataggtaacacaactcaggcagatatagccacgtggtacgaggcacgtgataaatgtaaagctctta gcgccccattggatggttatcttctagctgtcaattctgcagacgaaatggcgtatgtttctcagctgatccaacaaaag acaccaacatctcttggctggtggacaggattgaacgatatgaaaacagaagggcaatgggtctatgatacaccatttaa taatcctatagtatccaatgtcatgtag |
Protein
Protein ID | pfu_aug2.0_680.1_01045.t1 |
---|---|
Definition | - |
>pfu_aug2.0_680.1_01045.t1 MKKFVSTLVTVLLFHVQIDYSWSDHCPNGPWVNVQGTCYYFSTQPLTYKESFQQCQNLQSDLLIFFGEQDRLAFVNKTKS MGITTERWWTSLSDLNHPGTWTWGQSPAAVTALGNSVVWNVEPDDSAHIENCGAMNIQGTISDEKCGEKHGFICELPTSG GCPDGWMSTDTACYLFSDFSDPYSFKTWNNAKVYCSNVIQQAGPTAHLIYLETANELAYIRRQLPGVNMTSQIWWIGMND KLHENAWHWLEFESRRWLGVPFWSGLNFKQDQNLWYWSTGLSANRTLIHWDSEPNDFAGREDCAFIFQDGTFNDFPCFLP AAVACELDSEDAPCPAGWTPSLDEGSSSCYYIGNTTQADIATWYEARDKCKALSAPLDGYLLAVNSADEMAYVSQLIQQK TPTSLGWWTGLNDMKTEGQWVYDTPFNNPIVSNVM |