Gene
| Gene Model ID | pfu_aug2.0_680.1_01047 |
|---|---|
| Locus | scaffold680.1 : 242270 ... 245973 : - |
| To GenomeBrowser | scaffold680.1:242270..245973 |
| Genes list of scaffold | scaffold680.1 |
| Synonym | pfu_aug1.0_33241.1_26632 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-7-like | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_680.1_01047.t1 | 2 | 1 | Neur_chan_LBD | 28 | 48 | 1.1e-36 | 125.9 | 0.099 | 740.0 | -0.9 |
| pfu_aug2.0_680.1_01047.t1 | 2 | 2 | Neur_chan_LBD | 82 | 257 | 1.1e-36 | 125.9 | 6.7e-40 | 5.0e-36 | 123.8 |
| pfu_aug2.0_680.1_01047.t1 | 1 | 1 | Neur_chan_memb | 266 | 516 | 2.2e-21 | 76.8 | 4.8e-25 | 3.5e-21 | 76.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_680.1_01047.t1 | gi|676455908|ref|XP_009054158.1| | hypothetical protein LOTGIDRAFT_94361, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_680.1_01047.t1 | gi|524881419|ref|XP_005097361.1| | PREDICTED: acetylcholine receptor subunit delta-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_680.1_01047.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01047.t1 atgacaatatttcgttatttgctgcttttcttactttgtaatttgatgaagagaacggaatgtgtcacgtgggagaagcg tcagcagttgaataacgccatgttcaatgaatatcataaggatgtccagcctatcgagcaagccggaactcaaccaccgc tcgtacctccgcctgtctatccgggaggaggctctggtgtcaatttgccaccaaatccgggcagtactcacccaatagcg ggaaacatcttcgtaggtgtatcgatgcacttggcgtcactcaatgacatcaacgagatgtcgggtacaatgtcgacagt ggcttacctcacgttacgttggagagacccgcgtctgagatgggaccccgacacttacgatcaacttagaagaatctctc taccaatgcggaaaatctgggtaccgaatattttgctcgcaaatcctgttggcaagttttctacgataggatttcctgac tcggaagcggaaattcattttaccggagaagtcgtttggaagataggtgactttttacaaactgcttgcgatatagatat aacacatttcccatttgaccgtcagacgtgtgctattgatattaagagtgctaccccaatgagagaaatcaaactggttc cgtcaagaaaacgcatttataccagttttatgggcagtaatggagcatggacattgaagggaactagggtggatttgaca gttagaaatcataccggagttttgtcttttaaacttaatttagaacgtcgatcaacattcttcgtgatgaatttgtttgt tccggtggtagtgctaattcttctgaactcctttgtgtttatcctaccagccgattccggggagagaacaggctttgcga taacatgcatgcttgctatagccgtctttctgactttagtgtcggagacgttaccaaaaacatcaaaaccactgtcagtt ctatcttttatactcatgttatgtctgattttatcaacttgtgcatcaataatgaccatcattagtttatacattcacca taaagaagaaacgaaaccagtgccgaaattagttcagaattttttttcgatgaaaattggtagatgcatttgctgttgcc gtggaaaattgaagaggtcgttcaaaactcttacatctcgtgtaagtaaaatttgcaaatcccgagttcgcgaggaaaca aaatcggcgagctcggtgaggtctataattgtgggaagcccaaagggttcgacgttagacatgactaagaattttcccgg tgatgtggcgagcatgcgcagagtgtcatcagttcacgttgagaacttggatatgattgacgaagatgaagacataaatt ctcgttgtaaagatcccttaaaaattctgtcatctcttggggaaaacggcgaaattgagccgaacctaactcctggggac aaaggaaaacaaagtgaagatgaagattgggaagaggacaaaataacatggaaaattgtggcgaaaaaattcgacttttt ctgttttatctcagtgaatgccatggcaggtgctctcggtaccttgtattttatgattagttccggtagattatag |
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Protein
| Protein ID | pfu_aug2.0_680.1_01047.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01047.t1 MTIFRYLLLFLLCNLMKRTECVTWEKRQQLNNAMFNEYHKDVQPIEQAGTQPPLVPPPVYPGGGSGVNLPPNPGSTHPIA GNIFVGVSMHLASLNDINEMSGTMSTVAYLTLRWRDPRLRWDPDTYDQLRRISLPMRKIWVPNILLANPVGKFSTIGFPD SEAEIHFTGEVVWKIGDFLQTACDIDITHFPFDRQTCAIDIKSATPMREIKLVPSRKRIYTSFMGSNGAWTLKGTRVDLT VRNHTGVLSFKLNLERRSTFFVMNLFVPVVVLILLNSFVFILPADSGERTGFAITCMLAIAVFLTLVSETLPKTSKPLSV LSFILMLCLILSTCASIMTIISLYIHHKEETKPVPKLVQNFFSMKIGRCICCCRGKLKRSFKTLTSRVSKICKSRVREET KSASSVRSIIVGSPKGSTLDMTKNFPGDVASMRRVSSVHVENLDMIDEDEDINSRCKDPLKILSSLGENGEIEPNLTPGD KGKQSEDEDWEEDKITWKIVAKKFDFFCFISVNAMAGALGTLYFMISSGRL |
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