Gene
| Gene Model ID | pfu_aug2.0_680.1_01048 |
|---|---|
| Locus | scaffold680.1 : 246023 ... 256494 : - |
| To GenomeBrowser | scaffold680.1:246023..256494 |
| Genes list of scaffold | scaffold680.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| deoxyribodipyrimidine photo-lyase-like | GO:0003904 GO:0006281 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_680.1_01048.t1 | 1 | 1 | FAD_binding_7 | 77 | 246 | 9.6e-37 | 126.6 | 1.3e-40 | 2.0e-36 | 125.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_680.1_01048.t1 | gi|524873114|ref|XP_005093310.1| | PREDICTED: deoxyribodipyrimidine photo-lyase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_680.1_01048.t1 | gi|390345301|ref|XP_003726308.1| | 0.0 | |
| pfu_aug2.0_680.1_01048.t1 | gi|147904876|ref|NP_001089127.1| | CPD photolyase-like [Xenopus laevis] | 0.0 |
| pfu_aug2.0_680.1_01048.t1 | gi|727011580|ref|XP_010395517.1| | PREDICTED: deoxyribodipyrimidine photo-lyase-like [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_680.1_01048.t1 | gi|669266593|ref|XP_008642835.1| | PREDICTED: deoxyribodipyrimidine photo-lyase-like [Corvus brachyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_680.1_01048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01048.t1 gtggacgctcataatctggtaccatgctgggaggcctcaccaaagctggagtacggagctcgaacgatacggaacaaaat acataatcagctctcatcttacctgactgaattcccacctgtgtccaaacatccacataaaccaaagacttcagagcctg ttgactgggatgcagcatttaagagtttaaaggttgaccaaaaagttgaggaagttgagtgggcgctaccaggaaccact gcggggctaggtatgctggaatccttctgtaaagaaaggctgaagtacttctccgctgacaggaacaatcccaataaagc cgctctcagtaatttgtcgccatggatacattttggtcagatttccgtgcagcgatgtatcctaacagtgcggcagtata gagggcgctttaaagatggagtggaagcgtatatagaggaagcgattatacggagggaactgtccgataacttctgtttt tataataaaaactacgactcaatagagggagcttatgattgggccaaaacaaccctgagggaacatgagaaagataaaag aaaatatgtgtacagcagggaacagctagagtgcggcaaaactcatgatcaactttggaatgccgcacagaaacaaatgg tcactgagggtaaaatgcatgggtttctccgaatgtactgggcaaagaagatactggaatggacacctagtccacaggtt gccttggaaacagcgatttacctgaatgacaagtacagtcttgatggcagagatcccaatggttatgttggtatgtataa cctgtag |
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Protein
| Protein ID | pfu_aug2.0_680.1_01048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_680.1_01048.t1 VDAHNLVPCWEASPKLEYGARTIRNKIHNQLSSYLTEFPPVSKHPHKPKTSEPVDWDAAFKSLKVDQKVEEVEWALPGTT AGLGMLESFCKERLKYFSADRNNPNKAALSNLSPWIHFGQISVQRCILTVRQYRGRFKDGVEAYIEEAIIRRELSDNFCF YNKNYDSIEGAYDWAKTTLREHEKDKRKYVYSREQLECGKTHDQLWNAAQKQMVTEGKMHGFLRMYWAKKILEWTPSPQV ALETAIYLNDKYSLDGRDPNGYVGMYNL |
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