Gene
| Gene Model ID | pfu_aug2.0_6803.1_12897 |
|---|---|
| Locus | scaffold6803.1 : 5778 ... 17108 : - |
| To GenomeBrowser | scaffold6803.1:5778..17108 |
| Genes list of scaffold | scaffold6803.1 |
| Synonym | pfu_aug1.0_1790.1_08123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6803.1_12897.t1 | 3 | 1 | PQ-loop | 73 | 133 | 7.9e-24 | 82.9 | 3.2e-18 | 4.8e-14 | 51.6 |
| pfu_aug2.0_6803.1_12897.t1 | 3 | 2 | PQ-loop | 130 | 168 | 7.9e-24 | 82.9 | 1.1e-14 | 1.6e-10 | 40.3 |
| pfu_aug2.0_6803.1_12897.t1 | 3 | 3 | PQ-loop | 182 | 200 | 7.9e-24 | 82.9 | 0.3 | 4500.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6803.1_12897.t1 | gi|676489446|ref|XP_009064937.1| | hypothetical protein LOTGIDRAFT_222169 [Lottia gigantea] | 3.0e-23 |
| pfu_aug2.0_6803.1_12897.t1 | gi|524889185|ref|XP_005101153.1| | PREDICTED: lysosomal amino acid transporter 1 homolog [Aplysia californica] | 1.0e-21 |
| pfu_aug2.0_6803.1_12897.t1 | gi|167533493|ref|XP_001748426.1| | hypothetical protein [Monosiga brevicollis MX1] | 3.0e-18 |
| pfu_aug2.0_6803.1_12897.t1 | gi|260841381|ref|XP_002613894.1| | hypothetical protein BRAFLDRAFT_208580 [Branchiostoma floridae] | 2.0e-17 |
| pfu_aug2.0_6803.1_12897.t1 | gi|512856140|ref|XP_004916475.1| | PREDICTED: lysosomal amino acid transporter 1 homolog [Xenopus (Silurana) tropicalis] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_6803.1_12897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6803.1_12897.t1 cttgatacatacagaatcaaacatcaccaacacagaataaaacgctacgtcacaatgccgtggcaggtcccactattttt agaacacgaggagaggtcaatagtttttaatcctgtagctgtaccagccagcaatgtaactgatacaaactgtagtgctg gggtacagtttatttataaagtccttggtgactgtgtgacagacaccaaggggattctctcggatgcgtttggaattgcg tcaattgcattttggataatagtgagtgtgcctcagatggtaaagaactgtaggaatatacgaggtgtagagggagtgtc cttaggtctgatactgcagtggaccctgggggacacaaccaacttagtgggcagtattctcacaaaacaactcattttac agtataaaaggaagtccacggagggtttgtcattactgatgttctggctggcgattctaggaaatctaacgtacggctta tccatcctggtgaggcagttagacgcggtatttgttatacgacacataccatggctggtcggaagcctcggtgttatatt actagacgcctctgtatcctttatgctcgttattcagttcaagtattacggttcaacagacactctagaggaaatctcac gtaggccgctgttagagagtgaggtagatgtagagaatgacgttcctaattatcactcagtaaatagtgtagatggttat acatcatcatattcttaa |
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Protein
| Protein ID | pfu_aug2.0_6803.1_12897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6803.1_12897.t1 LDTYRIKHHQHRIKRYVTMPWQVPLFLEHEERSIVFNPVAVPASNVTDTNCSAGVQFIYKVLGDCVTDTKGILSDAFGIA SIAFWIIVSVPQMVKNCRNIRGVEGVSLGLILQWTLGDTTNLVGSILTKQLILQYKRKSTEGLSLLMFWLAILGNLTYGL SILVRQLDAVFVIRHIPWLVGSLGVILLDASVSFMLVIQFKYYGSTDTLEEISRRPLLESEVDVENDVPNYHSVNSVDGY TSSYS |
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