Gene
| Gene Model ID | pfu_aug2.0_684.1_14454 |
|---|---|
| Locus | scaffold684.1 : 33261 ... 52105 : - |
| To GenomeBrowser | scaffold684.1:33261..52105 |
| Genes list of scaffold | scaffold684.1 |
| Synonym | pfu_aug1.0_75508.1_41992 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_684.1_14454.t1 | 3 | 1 | NACHT | 182 | 208 | 8.2e-17 | 61.3 | 2.9 | 5300.0 | -3.1 |
| pfu_aug2.0_684.1_14454.t1 | 3 | 2 | NACHT | 411 | 520 | 8.2e-17 | 61.3 | 5.4e-10 | 1.0e-06 | 28.5 |
| pfu_aug2.0_684.1_14454.t1 | 3 | 3 | NACHT | 598 | 734 | 8.2e-17 | 61.3 | 4.2e-10 | 7.8e-07 | 28.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_684.1_14454.t1 | gi|156353045|ref|XP_001622888.1| | predicted protein [Nematostella vectensis] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_684.1_14454.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_684.1_14454.t1 atgagtcgccatgatgaggcacgttatggacgtgcttgcttgttagtactcaatatatgtccgtttactcttcgaagaac gatagaggacaatttcatacgacaaggatcattgagccttcaagacatgttggagaaaaataaacatcctctgtttcact tgttaaccagaacatgttgctgtagaagtaggcaaagcaaatcatcgccaatgaacagaactcaatgggactcactttac attaagaaccattcttcatgtgcaaaaggtcaacgaggtgaatgtccttgtcagtatgatgcaaagccaggaataacgac aaatatcatggatataacactgtgctgtctgattattacaaatatctgtgttggtataaacatgtcgcatataagtacta ttcgtgaaatacggaacaaactaatccacgctgaatctgcaagtttggatgagcaaactttctatgattattggaacaaa gtgaaaaccgctatcatcgacattgctagtcatgtatcaactacattacatttagacacattgaaaatggtacaggagct tgaatctcaagtaatgaatgtagaagaactagcccaggaactgcgacgattgttagtaaatgagaaaacatttctagatc tgaaggaggatgtcagttcaatctctgaaaatgtgaacatattaaaggaagttcaggtcaaatcttcaaaaatgctggag gcagcggcatgtaaagtgacggaaatagaaggaagtgtgtgtcagacaaggaaggatgttgacaggctgcagacagactt cgatattcaaagacgagaattgcaaacaatgcgagaggaccaagagagatataaagaaagaaattcagatgatgcaccaa atatcggctatttaaaggagaagatgttagaaataaatggtgatatcacaaaggatattccaataacaccaataaaagag aaaggagatgacgaattaccaatcgaattactttacgcatcggtcgttatacgagaagatccagcgtatattaaaaaaag acgtaatttcagtagcacatcagagacagacaatacagcatctgctagttacagaccatctatggagtatgaagaggaag gtgaaccttacagcgactcgtccgatgacgaagaaaacatatcaggacagaacacggacgtgaagcaacctgccgatgtt ttcatgaaaaatggtaagaaggtcaagaatattttcttgttaggtgatgcagcgcatggcaagacgacattctgtatttg gcttctgaagaactggtgtaatgcaattcagacggctagtgtagggacaaaaacacttaaaagatgggaaaaggcaatgt cggactttgactttgtgtttttattgcctttacgtcatatgaatccaaacagagtttcggttatagatatgatttgccag gatgtatttggtagagatcaaggttgtcatccctcgataagacatgtattatcatctgatcaatacagaagtcttatcat aatggacggccttgatgagtggaatccaaatgaaggagcacgaggacagttgacgtgtcaaggaatgccaaacatagaga atgtgtcttncagtagcacatcagagacagacaatacagcatctgctagttacagaccatctatggagtatgaagaggaa ggtgaaccttacagcgactcgtccgatgacgaagaaaacatatcaggacagaacacggacgtgaagcaacctgccgatgt tttcatgaaaaatggtaagaaggtcaagaatattttcttgttaggtgatgcagcgcacggcaagacgacattctgtattt ggcttctgaagaactggtgtaacgctattaagactgctagtgtagggacaaaaagacttaaaagatgggaaaaggcaatg tcggactttgattttgtgtttttattgcctttacgtcatatgaatccaaacagagtttcggttgtagatatgatttgcca agatgtattcggtagagaccaaggttgtcatccctcgataagacatgtattatcatctgatcaatacagaagtcttatca taatggacggccttgatgagtggaatccaaatgaaggagcacgaggacagttgacgtgtctaggaatgccaaacatagag aatgtgtctagtaatgtttcatgtttgttctcaatgcgaccatgggtatttccatcaataactaaaactgtaaaaatagt gacatcgttttag |
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Protein
| Protein ID | pfu_aug2.0_684.1_14454.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_684.1_14454.t1 MSRHDEARYGRACLLVLNICPFTLRRTIEDNFIRQGSLSLQDMLEKNKHPLFHLLTRTCCCRSRQSKSSPMNRTQWDSLY IKNHSSCAKGQRGECPCQYDAKPGITTNIMDITLCCLIITNICVGINMSHISTIREIRNKLIHAESASLDEQTFYDYWNK VKTAIIDIASHVSTTLHLDTLKMVQELESQVMNVEELAQELRRLLVNEKTFLDLKEDVSSISENVNILKEVQVKSSKMLE AAACKVTEIEGSVCQTRKDVDRLQTDFDIQRRELQTMREDQERYKERNSDDAPNIGYLKEKMLEINGDITKDIPITPIKE KGDDELPIELLYASVVIREDPAYIKKRRNFSSTSETDNTASASYRPSMEYEEEGEPYSDSSDDEENISGQNTDVKQPADV FMKNGKKVKNIFLLGDAAHGKTTFCIWLLKNWCNAIQTASVGTKTLKRWEKAMSDFDFVFLLPLRHMNPNRVSVIDMICQ DVFGRDQGCHPSIRHVLSSDQYRSLIIMDGLDEWNPNEGARGQLTCQGMPNIENVSXSSTSETDNTASASYRPSMEYEEE GEPYSDSSDDEENISGQNTDVKQPADVFMKNGKKVKNIFLLGDAAHGKTTFCIWLLKNWCNAIKTASVGTKRLKRWEKAM SDFDFVFLLPLRHMNPNRVSVVDMICQDVFGRDQGCHPSIRHVLSSDQYRSLIIMDGLDEWNPNEGARGQLTCLGMPNIE NVSSNVSCLFSMRPWVFPSITKTVKIVTSF |
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