Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_684.1_14455
Locus scaffold684.1 : 65346 ... 86827 : +
To GenomeBrowser scaffold684.1:65346..86827
Genes list of scaffold scaffold684.1
Synonym pfu_aug1.0_41247.1_12446

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_684.1_14455.t1 gi|676448406|ref|XP_009051722.1| hypothetical protein LOTGIDRAFT_228416 [Lottia gigantea] 7.0e-33
pfu_aug2.0_684.1_14455.t1 gi|156386458|ref|XP_001633929.1| predicted protein [Nematostella vectensis] 1.0e-26
pfu_aug2.0_684.1_14455.t1 gi|524891302|ref|XP_005102186.1| PREDICTED: spermatogenesis-associated protein 22-like isoform X2 [Aplysia californica] 3.0e-26
pfu_aug2.0_684.1_14455.t1 gi|524891300|ref|XP_005102185.1| PREDICTED: spermatogenesis-associated protein 22-like isoform X1 [Aplysia californica] 3.0e-26
pfu_aug2.0_684.1_14455.t1 gi|701327137|ref|XP_009975840.1| PREDICTED: spermatogenesis-associated protein 22 [Tauraco erythrolophus] 2.0e-24

Transcript
Transcript IDpfu_aug2.0_684.1_14455.t1
Definition-
>pfu_aug2.0_684.1_14455.t1
atgatgtgtacgcagttgcgtatgggcagctacgcgtctgaaagacttaatgtttactgtagcgtcatacatagaaaatc
ggttcctgctccaatattcaatgccagaaaaagaccacgacaggctgttataacggaacctggcaatcagttcctgaatg
aacattcctttcctgacagtagctcctctgatttgatgcctgttcatggtttcagccagccaaattctcactcgccaaga
aataatcatacagagagaagtttcagaggaaatcaacaaggtaagtttggtcgccaagacaacagaaataacaggggacg
aggtcacgtcaattcctataacaatcaacagcaacagaattcgagaggaggattttcaagaaatcgagggtcatttacac
agcaaggaaaacagcataggcctacttcaaactggtcatcaggacaaggccagagtggacgcttgaccagtggtcagtac
cagcaagaccatgggaatcaggagcatagatctcctctcaatagatcttacccgtcttttacttctggtgaaaatcaaga
taccaagagacctcagaccagtggtcagttacagcacagacatggacagagtactggtcagccaggacatggacatagta
ctggtcactcagggcatggacagaatgctggtcagtttgggcatggacagaacgctggtcaggtttggcgtggacagagc
gctggtcatttagggtgtggcaacagaaatgacccgccctggggaggagcaagttcagggtccctcgttgggggacagtc
ctcgatgaattcctggtcagggccggctggggataacagatttcccatgaatcatacagcagcaccacaggcacagaaac
ctagagatcaaaattcaagatccatttcatctcgtacattctccaacaatacagctcaaacctcaactcagaaagtagta
aatactgtaggaacctcaaaacagactccagccaagacaacagacgacagtacgttacatataataacaaccaacacaga
gggagtggtaaggtggagcaagtacaaagattacctgaatctgatgtttgaactttatggtatagttgactcagcagtga
ttactgaccaatcaggggcagctaagcagtttgtgttacgtgatgattgtggggagttacagtgtacattctatgaaatt
gatcgtccattaccccaactgaccagaggatatcttcacagggtggtcgggacctttgacagcaggaacaactatctgaa
gtgtctgtctgtccgtccatgctctcctgatgaggctaacatggcgtaccagaacgcgtacagacagcaggatcacctga
tagaactgaccaagcagttccgagaacaacttagggcattgtga

Protein
Protein IDpfu_aug2.0_684.1_14455.t1
Definition-
>pfu_aug2.0_684.1_14455.t1
MMCTQLRMGSYASERLNVYCSVIHRKSVPAPIFNARKRPRQAVITEPGNQFLNEHSFPDSSSSDLMPVHGFSQPNSHSPR
NNHTERSFRGNQQGKFGRQDNRNNRGRGHVNSYNNQQQQNSRGGFSRNRGSFTQQGKQHRPTSNWSSGQGQSGRLTSGQY
QQDHGNQEHRSPLNRSYPSFTSGENQDTKRPQTSGQLQHRHGQSTGQPGHGHSTGHSGHGQNAGQFGHGQNAGQVWRGQS
AGHLGCGNRNDPPWGGASSGSLVGGQSSMNSWSGPAGDNRFPMNHTAAPQAQKPRDQNSRSISSRTFSNNTAQTSTQKVV
NTVGTSKQTPAKTTDDSTLHIITTNTEGVVRWSKYKDYLNLMFELYGIVDSAVITDQSGAAKQFVLRDDCGELQCTFYEI
DRPLPQLTRGYLHRVVGTFDSRNNYLKCLSVRPCSPDEANMAYQNAYRQQDHLIELTKQFREQLRAL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495