Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_684.1_14457
Locus scaffold684.1 : 116866 ... 120720 : +
To GenomeBrowser scaffold684.1:116866..120720
Genes list of scaffold scaffold684.1
Synonym pfu_aug1.0_2734.1_08408

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_684.1_14457.t1 gi|524895013|ref|XP_005103995.1| PREDICTED: serine/arginine repetitive matrix protein 2-like [Aplysia californica] 2.0e-18

Transcript
Transcript IDpfu_aug2.0_684.1_14457.t1
Definition-
>pfu_aug2.0_684.1_14457.t1
atgacgcccgtcgggtcagtctcgaaaaccacaaccagtattcagccacctgttcagagtcagacggagcccacacggtc
gggcgctggcaggcctccgacgcccaagaaggccaccatcctcgcgaaatcgccatccgcaagaaatactgcccagtcaa
cggacaactcgtacaaaagcatataccaaaataggcgatcaaccacacccgggccaaacgaatttaggtcgatgtcgtta
caagagcgagaaaatcccgtacctcggcgatctgtaacgcccgggcccgagacacgtgcaagtacttttactccatcttc
aaaactttccggtacttatcagaggagtaatacgttgaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnaatggaatcgataaaaataaatcggtgtccgagtcggatactagcttcatagagaggaatcgggc
tagggcggcatccgcaagtccaatgatccagagaaaaccaccagcacagagttttcggactttgtcccgtcaaaagaacg
ttgaggaaaatataactgtaacggtcgatagggggagcggaaaacatagcatttctgtgaaagatggcgaggatacgaaa
tataaatcagaacgtccagcagctagagttatcgcccgtgcgccaacaccgacgcagaggaaatcggtcgaccatacggt
gcaaaatacccgaggtcgctctatatctttcgaatcgcagggttcgcgacctcgtccccgtagcgtcgacccagagcact
ggaacaaaggaaaagaggaaggtgtcgtcttggttgttaaacgaactgatggcggcggccacaaagttcaggatcgaaca
gaagcttgggtcgaatcggctgccaaaacggtggcatcaaggacttcttcgaataatcgtaaaattccaccaaaattaat
tcgctctaaaactccgaatcctaacgatatatatgaaaaagagcttcaatctagatcgctatccgagattaaagaagctt
tatcacttcccataaacggacttaaggaagtgaacacggaagatttggaagcgccaccggaagatcccgaaatgtatgcc
aaaatggaattattattccagaaaatgcgggagagggaactgaaagcctcagtgaacgagactcccggtgacggcttaat
gttagatttggacgttgaagggatcgagaacgaggacgaatcctcattagatagtaacgaaaatataaaacgcaaaaatt
ccgcaccacgtggcatttcgccggcgtccagcgccaaggcctcgttatcttccgtaccgtccactccgccgaggtccaaa
actccgtccatgtctcggtcaagttcgtcatctcagccattaagccgaccagtgtccacgccccctcgtccaagtacacc
tacacgctcctctgtgacgtcatctagaaggtctagtgtcaggtcgggaggcgattcggtgcctccgcagtcgccgtcat
ccgcgccgcaaaagttgaatgaaacacccgcaacgccgcaatcgccgggttcctccagtgttgatcacgctgtcgttctc
gtatcaaaaatcaaagaaattttgaatccaaaacccaggaaagacgaaaagactggtccaaaatccagaatacctgcacc
gaaatcactagctgctgccggaaaatctagatctttttccaacctcactgcgcatacaaacaatgattggtcaatcaaaa
ggcacgtgacagtcgatcataatcacgtgaacggaggtcctcagtatgatgacgattgtgaagattatgacgtaggagat
gaaatatcgggtataacatcacgtggcggaagttcttattcaagtggtaattcccggaatcagtccggatctaaaacgcc
ggttccaaaactagcaactccacttactactggaagaaaagctgttttaaacagagattgtaacgacaaatcttccaagt
tagttcgtgctgtgtctatttcaagtctttccagttcatcaaatacaatgtcatgcccaacacaagacgaagaggaattt
gtatga

Protein
Protein IDpfu_aug2.0_684.1_14457.t1
Definition-
>pfu_aug2.0_684.1_14457.t1
MTPVGSVSKTTTSIQPPVQSQTEPTRSGAGRPPTPKKATILAKSPSARNTAQSTDNSYKSIYQNRRSTTPGPNEFRSMSL
QERENPVPRRSVTPGPETRASTFTPSSKLSGTYQRSNTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXNGIDKNKSVSESDTSFIERNRARAASASPMIQRKPPAQSFRTLSRQKNVEENITVTVDRGSGKHSISVKDGEDTK
YKSERPAARVIARAPTPTQRKSVDHTVQNTRGRSISFESQGSRPRPRSVDPEHWNKGKEEGVVLVVKRTDGGGHKVQDRT
EAWVESAAKTVASRTSSNNRKIPPKLIRSKTPNPNDIYEKELQSRSLSEIKEALSLPINGLKEVNTEDLEAPPEDPEMYA
KMELLFQKMRERELKASVNETPGDGLMLDLDVEGIENEDESSLDSNENIKRKNSAPRGISPASSAKASLSSVPSTPPRSK
TPSMSRSSSSSQPLSRPVSTPPRPSTPTRSSVTSSRRSSVRSGGDSVPPQSPSSAPQKLNETPATPQSPGSSSVDHAVVL
VSKIKEILNPKPRKDEKTGPKSRIPAPKSLAAAGKSRSFSNLTAHTNNDWSIKRHVTVDHNHVNGGPQYDDDCEDYDVGD
EISGITSRGGSSYSSGNSRNQSGSKTPVPKLATPLTTGRKAVLNRDCNDKSSKLVRAVSISSLSSSSNTMSCPTQDEEEF
V

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495