Gene
| Gene Model ID | pfu_aug2.0_684.1_14459 |
|---|---|
| Locus | scaffold684.1 : 140516 ... 142898 : + |
| To GenomeBrowser | scaffold684.1:140516..142898 |
| Genes list of scaffold | scaffold684.1 |
| Synonym | pfu_aug1.0_9430.1_38911 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_684.1_14459.t1 | 2 | 1 | DDE_Tnp_1 | 108 | 133 | 1.0e-06 | 28.4 | 1.7 | 6300.0 | -3.6 |
| pfu_aug2.0_684.1_14459.t1 | 2 | 2 | DDE_Tnp_1 | 335 | 482 | 1.0e-06 | 28.4 | 6.1e-10 | 2.3e-06 | 27.3 |
| pfu_aug2.0_684.1_14459.t1 | 1 | 1 | DDE_Tnp_4 | 340 | 504 | 8.60397e-43 | 145.6 | 0.0 | 1.69978e-42 | 144.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_684.1_14459.t1 | gi|676430914|ref|XP_009046082.1| | hypothetical protein LOTGIDRAFT_137682, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_684.1_14459.t1 | gi|676461198|ref|XP_009055865.1| | hypothetical protein LOTGIDRAFT_145305 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_684.1_14459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_684.1_14459.t1 atgttacaagtcatagactttgctcctaatcctgattttgactattcgcaacttggtcaaaatgtgcaaaatcaaagtca ggatgacgatacactacgaaatagactagatgcagacagacaagcagctattgctaacaacgctgctacacaaaacttga taaatgatgtaaatactagagtggcaagaaaaaatcaacaggctgatgctatgttttcaaataatgggggaaggaatggt aatactgcaggaacagatactacgtttacatcttttgttcctactgaccccaatcagttagtacatacacctgttgggaa gaatgtgttgagttttgatgcttccttcttatcaaatcagacacaagcttctacaccagatgtcaagcctaaagtacaaa gtgatggtaacacaggtttgtacggtgccatgcatggtgggtcacatgatctgtcaggtgtcggacattctgtttcaaca tcgaacactaacgtgctcacaccaaatcagcctatgcaagtgcaaaatcaagcaccaaacgtacaaaatcaacttgtaca atctgtggcaaataatgctcaaatacaaaatcagccagtacaatctatggctaatcaacttattcaaatggttggtagtg taccacagtcttctggtactagttcagtacagagcggtgggatgttgtacactactataaaccagcctattacgtcacag tctgtcggttctcaaatgggacaaattggcgggctgcaaggtaatagcaatataagtatacaacctgtaatgacgccaag cgttcaacctggtcaatcggttcaaataccaccacctggttttccagtacctccgactagtcaaatgtaccagtctataa tgccaggagtgcctgtcggggcatatggtctgccatattttggtaatccgtatgtgcctgggggtccgtactttggttta cagccaatgggcatgagtccacattcatgatctatgtatccaaaaaccacctgtataatcgactgtacagaattccacat tgagaaaccagcaacaccaacagctcaggccaaaacatacagcacctataaaagtcgtaatacgtttaaagctttggttt cagtgaccccatcaggtgcattttctttcatttccaacctttggggtggcaatatatctgacagatttattacagaacac tgtgggtttttagatcatataaggaaaggtgatgaggtgatggcagataggggcttcatcatcagggacctccttcttga aagaggggcaagtctcaatatccctcctttcaccaaaaagtgttcatggggaaaaggtatacgtttgacagcagctgaca taaagaagactaggaaaatagctaaactaagaatacatgtggaaagggccatagggagattgaaaaactacaggattttg tcaaatactctacctttgaaactgaagcctctctccaaccagattgtgaaaataagtgccttcctttgcaatttacagcc accattggtcaaacaatag |
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Protein
| Protein ID | pfu_aug2.0_684.1_14459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_684.1_14459.t1 MLQVIDFAPNPDFDYSQLGQNVQNQSQDDDTLRNRLDADRQAAIANNAATQNLINDVNTRVARKNQQADAMFSNNGGRNG NTAGTDTTFTSFVPTDPNQLVHTPVGKNVLSFDASFLSNQTQASTPDVKPKVQSDGNTGLYGAMHGGSHDLSGVGHSVST SNTNVLTPNQPMQVQNQAPNVQNQLVQSVANNAQIQNQPVQSMANQLIQMVGSVPQSSGTSSVQSGGMLYTTINQPITSQ SVGSQMGQIGGLQGNSNISIQPVMTPSVQPGQSVQIPPPGFPVPPTSQMYQSIMPGVPVGAYGLPYFGNPYVPGGPYFGL QPMGMSPHSXSMYPKTTCIIDCTEFHIEKPATPTAQAKTYSTYKSRNTFKALVSVTPSGAFSFISNLWGGNISDRFITEH CGFLDHIRKGDEVMADRGFIIRDLLLERGASLNIPPFTKKCSWGKGIRLTAADIKKTRKIAKLRIHVERAIGRLKNYRIL SNTLPLKLKPLSNQIVKISAFLCNLQPPLVKQ |
|