Gene
| Gene Model ID | pfu_aug2.0_688.1_27669 |
|---|---|
| Locus | scaffold688.1 : 39586 ... 60427 : + |
| To GenomeBrowser | scaffold688.1:39586..60427 |
| Genes list of scaffold | scaffold688.1 |
| Synonym | pfu_aug1.0_319.1_00235 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_688.1_27669.t1 | 1 | 1 | Glyco_tranf_2_3 | 123 | 337 | 1.3e-08 | 34.8 | 1.6e-11 | 3.0e-08 | 33.7 |
| pfu_aug2.0_688.1_27669.t1 | 1 | 1 | Glycos_transf_2 | 124 | 313 | 8.7e-28 | 97.1 | 7.8e-31 | 1.5e-27 | 96.3 |
| pfu_aug2.0_688.1_27669.t1 | 1 | 1 | Glyco_tranf_2_2 | 124 | 339 | 1.1e-12 | 47.6 | 6.4e-15 | 1.2e-11 | 44.2 |
| pfu_aug2.0_688.1_27669.t1 | 1 | 1 | Ricin_B_lectin | 379 | 494 | 1.6e-16 | 60.4 | 1.4e-19 | 2.6e-16 | 59.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_688.1_27669.t1 | gi|260793003|ref|XP_002591503.1| | hypothetical protein BRAFLDRAFT_105269 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_688.1_27669.t1 | gi|312082212|ref|XP_003143351.1| | glycosyl transferase [Loa loa] | 0.0 |
| pfu_aug2.0_688.1_27669.t1 | gi|697434624|ref|XP_009680296.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 11 isoform X2 [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_688.1_27669.t1 | gi|260800261|ref|XP_002595052.1| | hypothetical protein BRAFLDRAFT_125761 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_688.1_27669.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_688.1_27669.t1 atgaacaagctgttacagttgtatccatggcaacgcagtatccaaaactggcttattccatggtctcaaaagtgctattc atggagtgacatcgttaccatggcaaccagagcagcagcagcagcaagaccaccaccatcaccactaccgccgccgtcgc cgccgccgccgcccagaggtcaagcgtattcaatgtttagtataaaacaggctatcaaaaatttgtcgtttcaaattgta cttgaagctgcggcggtggtggttgtggtggtgattgggagagaggaatctggaaaaggtgggagtgaaatcaatagaaa tactcgaagatgtagtcgaaagacatatccttcagacttgcctcttgtgtctgtcatcattccctttcgcaatgaagcat tatctgtccttctgaggactgtgcattgtataatcaacacaacacctcaacaaaatctggttgacattatcctggtggat gacggttccacggatgatgatgttaagtcaattttagacgtacatatcaaaggaatgagaaaagtaaagattttacgtct ctcaagtagcgtgggactgatgggagctcgccagaaagggattgagaatgcaacatcggacataatcgttgtcatggatt cacacatggaagttacagcaggttggtttgaacccattgcaactgagatgaaaatggaccccaaagctctactgactgga caggttggcgttatagacaaggatacattccaatttcaatcatttccgctggacaaagtccccgagaattccctcgatta ccagacgttcgatttctacctctaccagactggggcattcttgaaagaagagtatttgaaaacaaggaagatgaaatctg atccattctatattcctgccatccaaggtaacttcttcatgatgaacagaacaatgtttttgaaattagggggatttgat cttgggatgaagttatggggagctgaacagtttgaactctcgtttaagttggagtatggagatgtcgaagaacgccggaa aatacgaaggacgaataaatgcaaaccatttcagtattacttggataaagtcaaaacattcgctcatatctacataccca gaggaagaaaggcaaaagggataatccagaacgcagctacggaggcttgtttagatggaccactacattatggttctcag attgctattataacttattggtgccactataaaggatataatcagtattgggaattatcggccaaaggtcaactccgcca tagttatgtgtgcgttcgaagaaacatgacaaaccatgctgtaacagagaggtgcaaggagcatggtttagacgaacaga cttggcgttataatcagaatgatgaaatcgttgagcaatcatccggtctctgtctaacagccaacacagtaaacacacct gtacacctggaagcatgtaaaggaataagaaaccagaaatggttttggacaaggctcgaaagagatgactga |
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Protein
| Protein ID | pfu_aug2.0_688.1_27669.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_688.1_27669.t1 MNKLLQLYPWQRSIQNWLIPWSQKCYSWSDIVTMATRAAAAARPPPSPLPPPSPPPPPRGQAYSMFSIKQAIKNLSFQIV LEAAAVVVVVVIGREESGKGGSEINRNTRRCSRKTYPSDLPLVSVIIPFRNEALSVLLRTVHCIINTTPQQNLVDIILVD DGSTDDDVKSILDVHIKGMRKVKILRLSSSVGLMGARQKGIENATSDIIVVMDSHMEVTAGWFEPIATEMKMDPKALLTG QVGVIDKDTFQFQSFPLDKVPENSLDYQTFDFYLYQTGAFLKEEYLKTRKMKSDPFYIPAIQGNFFMMNRTMFLKLGGFD LGMKLWGAEQFELSFKLEYGDVEERRKIRRTNKCKPFQYYLDKVKTFAHIYIPRGRKAKGIIQNAATEACLDGPLHYGSQ IAIITYWCHYKGYNQYWELSAKGQLRHSYVCVRRNMTNHAVTERCKEHGLDEQTWRYNQNDEIVEQSSGLCLTANTVNTP VHLEACKGIRNQKWFWTRLERDD |
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