Gene
| Gene Model ID | pfu_aug2.0_688.1_27673 |
|---|---|
| Locus | scaffold688.1 : 184951 ... 188750 : - |
| To GenomeBrowser | scaffold688.1:184951..188750 |
| Genes list of scaffold | scaffold688.1 |
| Synonym | pfu_aug1.0_17611.1_18470 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_688.1_27673.t1 | 4 | 1 | Cornifin | 10 | 104 | 4.4e-18 | 65.7 | 1.7e-08 | 0.00013 | 21.8 |
| pfu_aug2.0_688.1_27673.t1 | 4 | 2 | Cornifin | 82 | 249 | 4.4e-18 | 65.7 | 3.4e-09 | 2.5e-05 | 24.1 |
| pfu_aug2.0_688.1_27673.t1 | 4 | 3 | Cornifin | 208 | 346 | 4.4e-18 | 65.7 | 2.5e-07 | 0.0018 | 18.0 |
| pfu_aug2.0_688.1_27673.t1 | 4 | 4 | Cornifin | 324 | 477 | 4.4e-18 | 65.7 | 5.6e-08 | 0.00042 | 20.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_688.1_27673.t1 | gi|676427655|ref|XP_009045018.1| | hypothetical protein LOTGIDRAFT_136482, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_688.1_27673.t1 | gi|734646474|ref|XP_010752378.1| | PREDICTED: papilin-like [Larimichthys crocea] | 6.0e-38 |
| pfu_aug2.0_688.1_27673.t1 | gi|625273211|ref|XP_007628183.1| | PREDICTED: mucin-19-like [Cricetulus griseus] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_688.1_27673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_688.1_27673.t1 atgtttcggtattgttctgtgagtgctgtaacagaatctgctgtgagtgctgtaacagaatctgctgtgagtgctgtaac acaatctacggtgagtgatgtaacagtatctactgtgagtgctgtaacagaatctgatgtgagtgctgtaacagaatctg ctgtgagtgatgtaacagaatctgctgtgagtgctgtaacagaatctgctgtgagtgatgtaacaaaatctgctgtgagt gctgtaacagaatctgctgtgagtgatgtaacagaatctactatgagtgctgtaacagaatctgctgtgagtgctattac agtatctgctgtgagtgctgtaacagaatctgccgtgagtgctgtaacagaatctgctgtgagtgctgtaacagaatcta ctatgagtgctattacagtatctgctgtgagtgctattacagtatctgctgtgagtgatgtaacagaatctactatgagt gctgtaacagaatctgccgtgagtgctgtaacagaatctgctgtgagtgatgtaacagaatctgctgtgagtgctgtaac agaacctgctgtgagtgatgtaacaaaatctgctgtgagtactaatacagtatgtgctgttagtgatgtaacagaatctg ctgtgagtgctattacagtttcttctgtgagtgctgtaacagaatctgctgtgagtgctgtaacagaatctactgtgagt gatgtaacagaatctactgtgagtgctattacagtatctgctgtgagtgatgtaacagaatctactgtgagtgctgtaac agaatatgctgtgagtgctgtaacagtatctgctgtgagtgctgtcacagaatctgctgtgagtgctgtagcagaatctg ctgtgagtgatgtaacagaatctactatgagtgctgtaacagaatctgctgtgagtgctataacagtatctgctgtgagt gatgtaacagattctgctgtgagtactattacagtatgtgctgttagtgatgtaacagaatctgctatgagtgctattac agtgtcttctgatgtaacagaatctgccgtgagttatgtaacagactctgcagctgtgagtgctgtaacagaatctgcgg tgagtgatgtaacagactctgttgtgagtgctgtaacaaaatctgctgtgagtgttgtaacagaatctgctgtgagtgtt ggaacagaatctgccgtgagtgctgtaacagaatctactgtgagtgttgtaacagaatctgctttaagtattgtaacaga atctgctgtgagtattgtaacagaatctgctttgagtgttgtaacaaaatctgctgtgagtgctgtaacagaatctactg tgagtgctgtaacaaaacctgctgtgagtgctgtaacagaatctactgtgagtggtgtaacagtatctactgtgagtgat gtaacagtatctactgtgagtgatgtaacagtatctgctgtgagtgatgtaacataa |
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Protein
| Protein ID | pfu_aug2.0_688.1_27673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_688.1_27673.t1 MFRYCSVSAVTESAVSAVTESAVSAVTQSTVSDVTVSTVSAVTESDVSAVTESAVSDVTESAVSAVTESAVSDVTKSAVS AVTESAVSDVTESTMSAVTESAVSAITVSAVSAVTESAVSAVTESAVSAVTESTMSAITVSAVSAITVSAVSDVTESTMS AVTESAVSAVTESAVSDVTESAVSAVTEPAVSDVTKSAVSTNTVCAVSDVTESAVSAITVSSVSAVTESAVSAVTESTVS DVTESTVSAITVSAVSDVTESTVSAVTEYAVSAVTVSAVSAVTESAVSAVAESAVSDVTESTMSAVTESAVSAITVSAVS DVTDSAVSTITVCAVSDVTESAMSAITVSSDVTESAVSYVTDSAAVSAVTESAVSDVTDSVVSAVTKSAVSVVTESAVSV GTESAVSAVTESTVSVVTESALSIVTESAVSIVTESALSVVTKSAVSAVTESTVSAVTKPAVSAVTESTVSGVTVSTVSD VTVSTVSDVTVSAVSDVT |
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