Gene
| Gene Model ID | pfu_aug2.0_690.1_01050 |
|---|---|
| Locus | scaffold690.1 : 17752 ... 26265 : - |
| To GenomeBrowser | scaffold690.1:17752..26265 |
| Genes list of scaffold | scaffold690.1 |
| Synonym | pfu_aug1.0_6075.1_16837 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_690.1_01050.t1 | 1 | 1 | NDUFA12 | 36 | 80 | 9.7e-12 | 45.2 | 1.7e-15 | 1.2e-11 | 44.9 |
| pfu_aug2.0_690.1_01050.t1 | 1 | 1 | DDE_3 | 94 | 161 | 1.7e-08 | 34.3 | 1.2e-11 | 8.6e-08 | 32.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_690.1_01050.t1 | gi|383861823|ref|XP_003706384.1| | PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Megachile rotundata] | 6.0e-27 |
| pfu_aug2.0_690.1_01050.t1 | gi|288856293|ref|NP_001165800.1| | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Nasonia vitripennis] | 6.0e-24 |
| pfu_aug2.0_690.1_01050.t1 | gi|755928279|ref|XP_011306971.1| | PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Fopius arisanus] | 8.0e-24 |
| pfu_aug2.0_690.1_01050.t1 | gi|759043597|ref|XP_011330692.1| | PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cerapachys biroi] | 6.0e-23 |
| pfu_aug2.0_690.1_01050.t1 | gi|746870953|ref|XP_011066681.1| | PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Acromyrmex echinatior] | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_690.1_01050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_690.1_01050.t1 atgagtcttttgcagaaaatacaacgaactagggagttgattagaggcaatggaggtttaatgggcacattaaaatctct ttattatatagatgaaataaaggaaggcagactagtgggagaagatgactatggcaacaagtattatgaaaataattatt attttttctcatcaaatagatgggtaaggtataaccccaatgtaaacatggaatatgatggtagccaggttcccccagaa tgttacgggaaaacattaaacttaagcactgcggaaagctcaccagttaaaggtgtgttgttccatcaggacaatgctcc tgttcacaagtatgttactgccatggctgccattcattattgtggccttaatttgattgagcatccgccttattcacctg atcttgctccatcagactttcatctattccctaaactgaaagcagctttttctggcacccactttcagtccgatgatgac gtcatacttgcagcatag |
|
Protein
| Protein ID | pfu_aug2.0_690.1_01050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_690.1_01050.t1 MSLLQKIQRTRELIRGNGGLMGTLKSLYYIDEIKEGRLVGEDDYGNKYYENNYYFFSSNRWVRYNPNVNMEYDGSQVPPE CYGKTLNLSTAESSPVKGVLFHQDNAPVHKYVTAMAAIHYCGLNLIEHPPYSPDLAPSDFHLFPKLKAAFSGTHFQSDDD VILAA |
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