Gene
| Gene Model ID | pfu_aug2.0_690.1_01056 |
|---|---|
| Locus | scaffold690.1 : 195639 ... 219742 : - |
| To GenomeBrowser | scaffold690.1:195639..219742 |
| Genes list of scaffold | scaffold690.1 |
| Synonym | pfu_aug1.0_13452.1_18003 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_690.1_01056.t1 | 1 | 1 | zf-DBF | 283 | 328 | 1.2e-16 | 60.1 | 2.0e-20 | 2.9e-16 | 58.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_690.1_01056.t1 | gi|524864314|ref|XP_005088994.1| | PREDICTED: uncharacterized protein LOC101863146 [Aplysia californica] | 0.0 |
| pfu_aug2.0_690.1_01056.t1 | gi|676478177|ref|XP_009061348.1| | hypothetical protein LOTGIDRAFT_234802 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_690.1_01056.t1 | gi|260823692|ref|XP_002606214.1| | hypothetical protein BRAFLDRAFT_105004 [Branchiostoma floridae] | 1.00053e-42 |
| pfu_aug2.0_690.1_01056.t1 | gi|585713454|ref|XP_006825097.1| | PREDICTED: DNA repair protein RAD50-like [Saccoglossus kowalevskii] | 1.0e-37 |
| pfu_aug2.0_690.1_01056.t1 | gi|390355872|ref|XP_003728644.1| | 6.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_690.1_01056.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_690.1_01056.t1 atgaaaagacccaatcaaaacgacaaagagaaggaagcaccaaaaggaaaaagaaaattagagttcaaagagaagaaatc cgagaagacgaggctcccgctagcagagaaaatcatccttgttgacctcaaagatggacctcagaaaaagaagatcgagg ctgatcttaaaatacttggagctagggttgatactttcctaagtaaggatattcattacttgataaccggtcagccaagg ccagtgtccagcagagatgaccaccatggtcagtctccggccagtccagccgatgtcaacacacctagtccctttaactg tggaccaagccccagccccactgtgggtgggggtaaacaggcacctccagaaacggttcctcgaggtaaagctattgcac aaagggcaaagagcagtaggcagttgggggttacagaggatttgtcacaactagtagtcagaaatgctgagaagtttggt gtcaaaattgtcgcccttgactctgctttgaaatggattcagcgagagttagccaagttaccagcctcattactaaaggg tccggataatcagaagggacgtaaccacatcagattaaagaagctgaagtccccatttatcaagttcgaggcagccagct tacagtacaaggcaatacagcaacatttagaggtgtggccacgggctaatacagacacacccaggggcacctgtccattt gatggcaatgatgaacatggttttaaatccaagagtggtaagaagcgccatagtacaagtattgtaggtggcgttagaat cgttacggcgggtgagattagacgacaaaaggagcagaggcggatccaggatcgtagaaggggatactgtgaatgctgtg aagataaatatgaggatctatataagcatgtcagagatgagaagcataaagcattcgtccgtgacaagaagaattacgag aaattagacgtacttattaggacgggaccagacgtggcatcatttatacagagggtcctgatgaatcactgtagtaaaaa atctacgactggaaaagatgctatggttaaagagaaggaaattgcagaattgccaggagagtcaggcatcgggatgaaat gtagtgcagttacaaatgggaacctaagaaggaaagtttctttaaggaaggaatctccaaggaaaaactccaagcattca ccctgtaaagcgagccttaaggggcacctatcaactacaaaatctcctctatcacacaaggaaactgttaatgattcaaa gacaggaccatgtgattcaaatcaagaaagtgcggaaaatgctcgtaggaggtcaccgagaaagtcacctagaaaatcac cgtttatatctaaaagtaagaatgagcaggacggtggtcattcattggaaagtcactttttccctgcaaggacgaggaac tttattgttgttcatcataaatctccaaaaaatgacaaaggtcccgttactaaggcagttaaggctactaaagatttaac gttatcaaagaaagctatagcggaaaacaatgtgtctggagaaaatgaggataaagctaaagctagtcatcgaagcaagg agcacattccaaatacatgtagactgtctcagggcattgaaaaattggctgtacataaagaggatcatattgaagaacaa tttctcaccgaacagacaggcgtagaaatgtctcccgttgttcaggagtcagatacttgttcaaatttgataaatgaaca ggttcagaataaagaaccttccattgatctggatacagtgagtaaggataatgaagaaaccactcagatttcagataaca aaaacccacaaattggtgctactgactctctgaaatcgaaggatggtgctacagtggactctgctggaaatgtaaatttt tcacctacatcaacatgtaggcggacatctttgcgtaggggaaataagagtggtgttaagacgagtaaagcagattcacc aagtcaagtcactactcagacagaaaaagttaacaaaaactctagtattatacatgtagatgtgtcacaggaagatgagg tagatggtaacgttgttatgctgtcaaaaacggtagtggaaaatgatgtcaacatcagtaacgctgaaaatagaaactca ctggaaggtgtgtcccatgatgcaacaaacaaaatggaagaaagcaggaggttgaggagtcctttaagtaggagttgtga aaagaatcagagcaggaatgcttcaactgtcagcaatgaaatggaagatggaaaagaaaaagtaatccatgctagagagg ttgccattaaaaatggaaatcaaatcctgagctcgcctttgagggccaaaatgtcagttgttacaaataagtgtaggaat gaacctagatcaccaaagataaaatctgtagttgttgtggaggaaagttccaacaaaatacaaactttagcggaaacttt cccagctgagcatacacagtctaaggagtccgagaacaaagttgaggttgaatcctcagcagtagagcttgcagaagatg cggactcatgtaatcacggtaacagagctcaaatcgaggctgaaacgtctccagaagacattgctaaatcaaaggagcct gatgacaatagcgtgatatcacctagtcattaccaggaacatcttctcgttgccagtgattttgtcgacaagattcaccg tttacgcgcaacaaatcgtaggaatcagattgtagacgaaaaagtgaaaattctaagtgaaggttcacctgttgtagcat caccaatgtgtagaactcaaaataacgttagttttcaaaaatctgaatctgaaaaaattcagaaagaagtttcatctatt tcttcagatattacaaatgaagcacagggaaggaaatgtttgaaaaagataaaacaatctgttcctggttcacctaaatt taataaatctcctgcgtttaaggcgaaaatgaaaaagaaaagtcgaaatttgcatgatataaggaatcctagaagatcgg tgttatgttcgaaaaatgatattgaactgataagtgattcatcgtcgcctacaaaagaaggaaatagtgactcagaaaaa ctgcctgacaattctagtcaaaagcctaagattcatgtaccagaaaaggggaaagttgcaagggtgaaggcactcagcag aaaaagactgttgtctgctgtacagaaatcaccagaaagcaaagttcctagaaggtcgttgagaagtgcaacagaaaaca gtttgtgtacaaactctggtgacgcagataataataaagaggaaaaagatggtgggagaggaaatcaattcataggacaa tgtataaatactactgtaaagattttgcaggaagatgagcatagctcaacaaatcttcaagaaggtttacgtaaatcagc taggaataggcaattggggagaggccaaaattcgctggattctggaatagttcatcagggattagaagagagtaataagg acagtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnncttcatgttcaacctcagttttgagagaaagtactaattcagtttcaaatgtggctacctctaatgatg gcaaattcgtggccatcaagaaaatcgatccttcgactccaattctgaagggaaggcctacatttgccgagtcagatgca agaacatctctcttatcatcagaaattaagtcaccgtcaaaatctccgagacaaagacggaaaactgtcaacaaaaattc tgcttcaccgttcagtctcacctggcgcaatgcaaaagggtacacccctaaaagcaaacgaaaaagagtttccctgaata agagctggaatttactgagtaatcgcagtattgtgaaattatttgaaaacgataaagatgaggaagtttttgaaggtttt gagccaactgagttgaatgaggagaaagcggtagtcagcgaggcatcgtatgtggaaactacagaagtagaattcgagaa tgactccgatcgtgaatggtacgtagaagaagaggaagacgaaaataatcttagtgcatatgtaccgaatattctgtcat cccctgggtttaaatctgactcatcctggggtgaagcgtgtgcagattttataaacagtaaggctaatagttctttactc agagcttctagccctagaaggtctagtcctagacgatctccgttaaaaatggtcagaaaccttatgaaatctccgaaggg caaatgtaagtcgaatgtaacatctgcaagcggacaccagaagtgtgagaaaagaaagcgtttacaaagccaggaaaatg atgactcagtgcttgatgggaaaaattctcgtaaacggaagaagatatcacaatcacaaagtgttacatttgtgatggag aatggggttgataaaggaaatgaagaagatggtgttgagaaagtagatgatgatattgtattcaattatatgagccctca gaaacttaaacataagtgtgatgaatcagatgaagaaataatggggatttcctcaagtccactcaaagaaactgccgtcc ttaaaacgtcaactccacacgcacgagtagaaaggagaagtaaccttagtaaaaaggccctgaatttatcaaatgtgttc gtatctaatgaagaccctacgtccagtgctattgggtcacactcatttccaatgctggaacatagaaatgaaaatagaca ggaaaacaatatcgcaactagatgttctgaaaagggggaggataaatctgctaaaagtaatgaaaatgtttctagccgcg ttcaacgccgaagtggaaggcttcatagaagctga |
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Protein
| Protein ID | pfu_aug2.0_690.1_01056.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_690.1_01056.t1 MKRPNQNDKEKEAPKGKRKLEFKEKKSEKTRLPLAEKIILVDLKDGPQKKKIEADLKILGARVDTFLSKDIHYLITGQPR PVSSRDDHHGQSPASPADVNTPSPFNCGPSPSPTVGGGKQAPPETVPRGKAIAQRAKSSRQLGVTEDLSQLVVRNAEKFG VKIVALDSALKWIQRELAKLPASLLKGPDNQKGRNHIRLKKLKSPFIKFEAASLQYKAIQQHLEVWPRANTDTPRGTCPF DGNDEHGFKSKSGKKRHSTSIVGGVRIVTAGEIRRQKEQRRIQDRRRGYCECCEDKYEDLYKHVRDEKHKAFVRDKKNYE KLDVLIRTGPDVASFIQRVLMNHCSKKSTTGKDAMVKEKEIAELPGESGIGMKCSAVTNGNLRRKVSLRKESPRKNSKHS PCKASLKGHLSTTKSPLSHKETVNDSKTGPCDSNQESAENARRRSPRKSPRKSPFISKSKNEQDGGHSLESHFFPARTRN FIVVHHKSPKNDKGPVTKAVKATKDLTLSKKAIAENNVSGENEDKAKASHRSKEHIPNTCRLSQGIEKLAVHKEDHIEEQ FLTEQTGVEMSPVVQESDTCSNLINEQVQNKEPSIDLDTVSKDNEETTQISDNKNPQIGATDSLKSKDGATVDSAGNVNF SPTSTCRRTSLRRGNKSGVKTSKADSPSQVTTQTEKVNKNSSIIHVDVSQEDEVDGNVVMLSKTVVENDVNISNAENRNS LEGVSHDATNKMEESRRLRSPLSRSCEKNQSRNASTVSNEMEDGKEKVIHAREVAIKNGNQILSSPLRAKMSVVTNKCRN EPRSPKIKSVVVVEESSNKIQTLAETFPAEHTQSKESENKVEVESSAVELAEDADSCNHGNRAQIEAETSPEDIAKSKEP DDNSVISPSHYQEHLLVASDFVDKIHRLRATNRRNQIVDEKVKILSEGSPVVASPMCRTQNNVSFQKSESEKIQKEVSSI SSDITNEAQGRKCLKKIKQSVPGSPKFNKSPAFKAKMKKKSRNLHDIRNPRRSVLCSKNDIELISDSSSPTKEGNSDSEK LPDNSSQKPKIHVPEKGKVARVKALSRKRLLSAVQKSPESKVPRRSLRSATENSLCTNSGDADNNKEEKDGGRGNQFIGQ CINTTVKILQEDEHSSTNLQEGLRKSARNRQLGRGQNSLDSGIVHQGLEESNKDSXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCSTSVLRESTNSVSNVATSNDGKFVAIKKIDPSTPILKGRPTFAESDA RTSLLSSEIKSPSKSPRQRRKTVNKNSASPFSLTWRNAKGYTPKSKRKRVSLNKSWNLLSNRSIVKLFENDKDEEVFEGF EPTELNEEKAVVSEASYVETTEVEFENDSDREWYVEEEEDENNLSAYVPNILSSPGFKSDSSWGEACADFINSKANSSLL RASSPRRSSPRRSPLKMVRNLMKSPKGKCKSNVTSASGHQKCEKRKRLQSQENDDSVLDGKNSRKRKKISQSQSVTFVME NGVDKGNEEDGVEKVDDDIVFNYMSPQKLKHKCDESDEEIMGISSSPLKETAVLKTSTPHARVERRSNLSKKALNLSNVF VSNEDPTSSAIGSHSFPMLEHRNENRQENNIATRCSEKGEDKSAKSNENVSSRVQRRSGRLHRS |
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