Gene
| Gene Model ID | pfu_aug2.0_690.1_01057 |
|---|---|
| Locus | scaffold690.1 : 224379 ... 249352 : - |
| To GenomeBrowser | scaffold690.1:224379..249352 |
| Genes list of scaffold | scaffold690.1 |
| Synonym | pfu_aug1.0_14297.1_39593 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_690.1_01057.t1 | 1 | 1 | Patched | 244 | 455 | 1.0e-18 | 66.6 | 5.3e-22 | 1.6e-18 | 66.1 |
| pfu_aug2.0_690.1_01057.t1 | 2 | 1 | Sterol-sensing | 246 | 310 | 0.0 | 155.5 | 0.13 | 370.0 | 0.4 |
| pfu_aug2.0_690.1_01057.t1 | 2 | 2 | Sterol-sensing | 317 | 461 | 0.0 | 155.5 | 0.0 | 0.0 | 155.5 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 1 | WD40 | 803 | 835 | 9.8e-14 | 50.6 | 0.00021 | 0.63 | 10.0 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 2 | WD40 | 1046 | 1070 | 9.8e-14 | 50.6 | 0.00073 | 2.2 | 8.3 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 3 | WD40 | 1083 | 1098 | 9.8e-14 | 50.6 | 0.48 | 1400.0 | -0.7 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 4 | WD40 | 1168 | 1195 | 9.8e-14 | 50.6 | 0.00099 | 2.9 | 7.8 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 5 | WD40 | 1202 | 1239 | 9.8e-14 | 50.6 | 5.4e-08 | 0.00016 | 21.4 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 6 | WD40 | 1243 | 1275 | 9.8e-14 | 50.6 | 0.078 | 230.0 | 1.8 |
| pfu_aug2.0_690.1_01057.t1 | 7 | 7 | WD40 | 1298 | 1317 | 9.8e-14 | 50.6 | 0.62 | 1800.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_690.1_01057.t1 | gi|676452625|ref|XP_009053091.1| | hypothetical protein LOTGIDRAFT_239368 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_690.1_01057.t1 | gi|524912739|ref|XP_005111210.1| | PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_690.1_01057.t1 | gi|260811942|ref|XP_002600680.1| | hypothetical protein BRAFLDRAFT_118545 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_690.1_01057.t1 | gi|543742674|ref|XP_005512185.1| | PREDICTED: LOW QUALITY PROTEIN: sterol regulatory element-binding protein cleavage-activating protein [Columba livia] | 0.0 |
| pfu_aug2.0_690.1_01057.t1 | gi|529419538|ref|XP_005229633.1| | PREDICTED: sterol regulatory element-binding protein cleavage-activating protein [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_690.1_01057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_690.1_01057.t1 atgaggtccatacaggagagtgttaaacaagtgtactacacgtacggactgttctgtgccagtcatccgttctctatcct gactggaatgatatgtttcatcctgattacattttatccactcactcatttacccctgcctggaactgttccactggagt actctgcccctgttaaggatttcagcatcccccagaaggtggctgcaccagtcactggcaaaagaaaggtccaattagaa gaaactgagagtcctagatggtttcaaggccagcctgtgggatatatccaacaaatcgttgtcatgacaacagtgtcacc atggaaatcacagtacatgttgcctagcgacgccttcagattaccactatttaaggtgtttgagattcttgatgaagtgg agaaaattcagatcaaagaaggggagagagaatactctgtatcagatatttgtttacgtgtgtcagaggtggttctggac agagaggccaagtctctatttcctcaatactcatgtctcatcatgtcccctgctaacttctggaaaaacgataaaaaggc ctacacagatgacggagagatactgagaacagtgtttaagagacacagccctccactggagtcaccaccttatgttagag atgttttatttggaattccttggaagaaatcgggcatatcacgctactttattcagaataaacaaagaactatatcctat gctttaactatggtcatgaaaaactacgaccaaagatttattcaagctttacgtcagaagttagagtccctttacccaga aacgttgaagaatgtaaacaatagtgagatatcagaaatcatcaatgttcactacagagagagcaagttcttctcggagt atgcctacctactcgtcacgtatatgttcctagccatgtacctttacttctctgtccgtaaaatagagatggtaaaatct aagtggggccttgcattgagtgccgtcgtcacagttgtctcatcgttattgatgtctgtaagtttttgctctgtgtttgg actcactcccacactgaatggaggagaaattttcccgtatctagtagttctagttggactggagaacattttagttataa ctaaatctgttgtatcaactcctgtagacttggaggtgaaatatcgtatagcacaaggtatcagtaaggagggttggtcc atcaccaagaacttggctacagaactcatcatcgtcaccgggggattctttacatttgttcctgctatacaggagtttgc gatgtttgctctggtagggttactgacagactttttcctccagttaggatttttccttacagtattatctatagacatca ggagaatggagctctcagacctgaacagagctcggggaataaggacttcaacctccgacatgctcagttacaatatcgag cctttggtccagtgtccggtgaaatcccttataccaactaaatctgtggcaggatctgtacctgtaaccaagaaacacag acggacatcatcaaatatttcagtagggcctcctacaccaatgggagagaactctttctcacaggaatctcggagacttc gactgatggagatcttggctaacacacgaatgatacagagattcattatggtatgtactgtcatatggattggtttgatt gtttataaaactggcttggtggagcacctagcaaacagtacgctctccaacatgcctgctcctaagacaaccaatgggga ggctccaaaacctcaaggggtggagctaaatgctggcaaagatccaacgacggcctcctggtttccatggtcacaggacc aaaataagaatggctacctgagacacacagatctggaattacataaagaactgtcctataaacactggccgaccatgttt ggctattataacatcagtctgtatggaaagtttatcagtatcctgccgtccattcatgtatctgtcaacattgaccccaa cgaggccatcagcttccgtcatccgtcagaaaacattggtaaaagctccgaacagctgaaaaaagaaatcgaggaaatca gtaaggagatggaaagtggaaaaattgacgaagtcctctctgacgataaaagcttgctagaagtcttaccctcggccatg tatgatcctgaagtattgagaaaactttacgaccctgaagaattgaagaaactatatccaaaatctaaacgtgagcttct cgctacgattttactggtagttttcagcatcatatgcctgtcttatttctccgtggccctgtatcattgtatatgtccta aaaactacgccaaatggagggctcggtggttcagaaggaaaagcaggcagagtcagtacttccgacaaatagtggaatca gtacctaaagtgcttaaaggtcatctacaggagatagagtgtgtgataacagatggacagtttataatgagtgcctgttt gggaggagaactgagagtttgggactccctatcaggagactgtgtcacagctatacataggaaatgtgccacaccacctg tgactcgcaaaccttgcctggggagaaacataaatgacagtgatgctgatttgtatgccgagtaccatggcaacggtaac catggcagtagtatccatgacgacgatgatgccataacaactgatgatacatcaacacagtctgtcaggctaagatctag aggagttacagctaaaccgaaatcaaaacaagcaaggaagcttttcatgaatgagccagatttgtcgggaactatagata caaatttctcgcagctgaaaagccctgctgcgtcttcaccagggaatgcctccttcaattctagcatgtatagcgactct tctttcaatgtgtcagacggcagtcttcaaggctctccaaacgttagttgtatacctacaagtgagggttatcagtttgg agctagatttgatcagatatatactgagcacaagcagagtgtagagcaaagtaacatagaggaatacggtaaagaggatc acagggcacggagctggagtgcaggagatctcccaggtgtaacccagcatgatgctgcctggttggactcgggatttgag aataaccaagcgccctctatatggtgcctggcgtgccatgacggccttatagtagcgggatgtggtaacggtagaataga gttttgggatggtgctactggctcactgaagtatatgtatggtgaaaaccacataggagtaacctccctttgttttgtca ataaaaggattgtagcatccagaatagatggatccttggatttcctggaattagagacattccataatcctgtcatttct acagtatctcaacataacccacctagcagctctcataccaaaggtcattctcgtaccaaaagccaagtgacagttcccac ccaggaatcccttagaaaatgggaagaaatcatacacataaacctaatgaagacagtgaaagcccaccaacaacctgtga taatgttacagtgtgaaggagggagggttgtcactgccagtcaagatcacacactcaaggtgttccgtcttgaggatgct ctgtgtttatttaccctgcatggtcacaatcataaaatcacagtattatatatggataagggtccccctttccacgctgc cagcggtgattctgacggcacagtgcggctctgggacctccacacaggatcctgtctacacaagacacgtgttcacgatg gtgctattgtagctttaacttgtacggctaaacacactatctgctcgggactcgatgacagattgtgtatatttgataga gtcagaggaaatgtggtccatgttctagaaatggatccatgcagtaataacagtatggccttactgaccagtaacctcct agtaaccggcggtcaagggtgtataaatctggtagatatcaacaaagggacaatactccgacggcaatcagctattgaaa gtcatgcagcgactatcgtcacatcactatag |
|
Protein
| Protein ID | pfu_aug2.0_690.1_01057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_690.1_01057.t1 MRSIQESVKQVYYTYGLFCASHPFSILTGMICFILITFYPLTHLPLPGTVPLEYSAPVKDFSIPQKVAAPVTGKRKVQLE ETESPRWFQGQPVGYIQQIVVMTTVSPWKSQYMLPSDAFRLPLFKVFEILDEVEKIQIKEGEREYSVSDICLRVSEVVLD REAKSLFPQYSCLIMSPANFWKNDKKAYTDDGEILRTVFKRHSPPLESPPYVRDVLFGIPWKKSGISRYFIQNKQRTISY ALTMVMKNYDQRFIQALRQKLESLYPETLKNVNNSEISEIINVHYRESKFFSEYAYLLVTYMFLAMYLYFSVRKIEMVKS KWGLALSAVVTVVSSLLMSVSFCSVFGLTPTLNGGEIFPYLVVLVGLENILVITKSVVSTPVDLEVKYRIAQGISKEGWS ITKNLATELIIVTGGFFTFVPAIQEFAMFALVGLLTDFFLQLGFFLTVLSIDIRRMELSDLNRARGIRTSTSDMLSYNIE PLVQCPVKSLIPTKSVAGSVPVTKKHRRTSSNISVGPPTPMGENSFSQESRRLRLMEILANTRMIQRFIMVCTVIWIGLI VYKTGLVEHLANSTLSNMPAPKTTNGEAPKPQGVELNAGKDPTTASWFPWSQDQNKNGYLRHTDLELHKELSYKHWPTMF GYYNISLYGKFISILPSIHVSVNIDPNEAISFRHPSENIGKSSEQLKKEIEEISKEMESGKIDEVLSDDKSLLEVLPSAM YDPEVLRKLYDPEELKKLYPKSKRELLATILLVVFSIICLSYFSVALYHCICPKNYAKWRARWFRRKSRQSQYFRQIVES VPKVLKGHLQEIECVITDGQFIMSACLGGELRVWDSLSGDCVTAIHRKCATPPVTRKPCLGRNINDSDADLYAEYHGNGN HGSSIHDDDDAITTDDTSTQSVRLRSRGVTAKPKSKQARKLFMNEPDLSGTIDTNFSQLKSPAASSPGNASFNSSMYSDS SFNVSDGSLQGSPNVSCIPTSEGYQFGARFDQIYTEHKQSVEQSNIEEYGKEDHRARSWSAGDLPGVTQHDAAWLDSGFE NNQAPSIWCLACHDGLIVAGCGNGRIEFWDGATGSLKYMYGENHIGVTSLCFVNKRIVASRIDGSLDFLELETFHNPVIS TVSQHNPPSSSHTKGHSRTKSQVTVPTQESLRKWEEIIHINLMKTVKAHQQPVIMLQCEGGRVVTASQDHTLKVFRLEDA LCLFTLHGHNHKITVLYMDKGPPFHAASGDSDGTVRLWDLHTGSCLHKTRVHDGAIVALTCTAKHTICSGLDDRLCIFDR VRGNVVHVLEMDPCSNNSMALLTSNLLVTGGQGCINLVDINKGTILRRQSAIESHAATIVTSL |
|