Gene
| Gene Model ID | pfu_aug2.0_692.1_07798 |
|---|---|
| Locus | scaffold692.1 : 3456 ... 5455 : + |
| To GenomeBrowser | scaffold692.1:3456..5455 |
| Genes list of scaffold | scaffold692.1 |
| Synonym | pfu_aug1.0_10792.1_10207 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_692.1_07798.t1 | 3 | 1 | zf-C3HC4_3 | 12 | 67 | 3.3e-08 | 33.0 | 2.2e-11 | 3.3e-08 | 33.0 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 1 | zf-RING_2 | 13 | 63 | 7.4e-09 | 35.3 | 5.0e-12 | 7.4e-09 | 35.3 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 1 | zf-C3HC4 | 14 | 62 | 1.2e-09 | 37.6 | 7.9e-13 | 1.2e-09 | 37.6 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 1 | zf-C3HC4_2 | 14 | 62 | 1.2e-09 | 37.9 | 8.4e-13 | 1.2e-09 | 37.9 |
| pfu_aug2.0_692.1_07798.t1 | 2 | 1 | zf-RING_UBOX | 14 | 60 | 6.1e-07 | 29.0 | 4.1e-10 | 6.1e-07 | 29.0 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 1 | zf-RING_5 | 14 | 63 | 1.7e-06 | 27.6 | 1.2e-09 | 1.7e-06 | 27.6 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 1 | zf-C3HC4_4 | 14 | 62 | 4.9e-06 | 26.3 | 3.3e-09 | 4.9e-06 | 26.3 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 1 | zf-B_box | 28 | 37 | 1.5e-07 | 31.1 | 0.94 | 1400.0 | -0.8 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 2 | zf-B_box | 59 | 63 | 1.5e-07 | 31.1 | 6.7 | 9900.0 | -3.5 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 3 | zf-B_box | 98 | 147 | 1.5e-07 | 31.1 | 6.9e-09 | 1.0e-05 | 25.3 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 2 | zf-C3HC4_3 | 99 | 134 | 3.3e-08 | 33.0 | 0.023 | 35.0 | 4.1 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 2 | zf-C3HC4 | 102 | 136 | 1.2e-09 | 37.6 | 0.043 | 65.0 | 3.3 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 2 | zf-C3HC4_2 | 102 | 134 | 1.2e-09 | 37.9 | 0.018 | 26.0 | 4.9 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 2 | zf-RING_2 | 102 | 134 | 7.4e-09 | 35.3 | 0.073 | 110.0 | 2.7 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 2 | zf-RING_5 | 102 | 134 | 1.7e-06 | 27.6 | 0.00016 | 0.24 | 11.1 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 2 | zf-C3HC4_4 | 119 | 133 | 4.9e-06 | 26.3 | 0.45 | 670.0 | 0.2 |
| pfu_aug2.0_692.1_07798.t1 | 2 | 2 | zf-RING_UBOX | 121 | 135 | 6.1e-07 | 29.0 | 2.1 | 3100.0 | -2.1 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 4 | zf-B_box | 166 | 197 | 1.5e-07 | 31.1 | 2.6e-07 | 0.00038 | 20.2 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 3 | zf-C3HC4_2 | 168 | 194 | 1.2e-09 | 37.9 | 10.0 | 15000.0 | -4.5 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 3 | zf-C3HC4_3 | 168 | 194 | 3.3e-08 | 33.0 | 10.0 | 15000.0 | -6.5 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 3 | zf-RING_2 | 177 | 199 | 7.4e-09 | 35.3 | 0.67 | 990.0 | -0.4 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 3 | zf-C3HC4 | 183 | 193 | 1.2e-09 | 37.6 | 10.0 | 15000.0 | -6.5 |
| pfu_aug2.0_692.1_07798.t1 | 3 | 3 | zf-RING_5 | 186 | 192 | 1.7e-06 | 27.6 | 10.0 | 15000.0 | -5.3 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 3 | zf-C3HC4_4 | 186 | 195 | 4.9e-06 | 26.3 | 0.43 | 640.0 | 0.3 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 4 | zf-C3HC4_4 | 299 | 313 | 4.9e-06 | 26.3 | 7.2 | 11000.0 | -3.6 |
| pfu_aug2.0_692.1_07798.t1 | 4 | 4 | zf-RING_2 | 331 | 350 | 7.4e-09 | 35.3 | 6.9 | 10000.0 | -3.6 |
Transcript
| Transcript ID | pfu_aug2.0_692.1_07798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_692.1_07798.t1 atggcttcgcttcacgacgctcaggtgaacttgacaacgtgtccaatttgttttgaaacattcaaaagaccaaagcattt accttgtttgcacacattttgtgaggagtgcataagtaactacatttcgagtgtgtttacaaaagaaggcagaaactcat tcacagaaatttcatgtccactctgccgcctaaaagtgaccaaaccggaaaatatcagcgcagaggaatggggaaagaat ctcccatcaaatcatttgattataaatgtaatagactgtgagcgcttaaacaaggaaaaactttgcaatccttgtgaaag agaaaacgaaagtgaaaaagcaactcgctggtgcgttgaatgtcgagacttgctttgcgaaaagtgtgtcaaaacacatg caaagttcaggttttcaatgagtcacaaagttgtttctctgtctgagctgacagaagaatcacctatcgctaagcctaac agttcttctgttgtaagttactgcgagaaacatcaacagaaagttttagaggcgtattgctcagaccatcgtgttacatg ttgcatatcttgtgtaactatagaacacagaaaatgtgacaatgtggggactatagagtctgtggccgaagaagttcgaa aatcaaagaagttggaagatctagagaaatttttcttgaaatcaaatgatgaaataggtaaaatgataggtacaacaaaa caaaacctagagaatttgagcaaacaatacgatgaatatgaacaagaaattgggaaaacattcgttagacttcagaaact acttgaaaatggaaaagaacaatcattgaaagaacttacagctgtaagaaaagaagtggaaccaaaggttgagagcacac gggatgagtacgtttgtcagcagtctgtaatcagtaactgcttgaatgttatacaacacgggttgcagttcgcatcagat gcacagttacttatagagatgcagaaactttttgagcaaaagtgtaacatggaagaatacatacagaaagaaagaaagca tcaaagatgctaccaattagaatttatagaggacaaagaaatatccaaagttgaaagcaaattacaacacctaggtacga ctaagtgtttacagacagggatgttcatgccggatgtttctatgttaaatggaagttcaaattttatcagaaaattagaa gtcaactcatcatacgtctttggtggtaccatcttagaagacggccgtttactaattccaacatttagcaaaaaaacatt agagcttttttcagcagatggaaattctctatcccagttagaatttgacggtgatacatttgatgtagacatggatgaaa attgtcgtcatggtgttgtttcatcatggatgggttgttggatagcactttttgaactgaaaaacggtaagctagtaaga aaggatctaaaacaatttcaatcatgttgtggggcagttcggtacaaaaatgatcaagtctttgtagcatgtcaaaaaga aattatgattgtgaatggttacaccggtgattccttaagaacattgtcattagttgttggggaagctcaatttctggaac tggatcacattaactcaatggtttattactcaagatacagtgaagtgaattatgtttcattcgatggaaacgagaatggc gttcttcttaataaagaagcaggtatacaccgggttgcaagtatagtttgcgattttgaacagaacatttatatcattga ccaaggtgcaaaaagcttaaaacaatttaccagacataagaaattttctagaaatatcgtgaaaggattgaataatctat atgctgcacggttcatgaagaactcaaatatgttcatgatcagcgatgggggagatgtgatgatttatgaaataatttga |
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Protein
| Protein ID | pfu_aug2.0_692.1_07798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_692.1_07798.t1 MASLHDAQVNLTTCPICFETFKRPKHLPCLHTFCEECISNYISSVFTKEGRNSFTEISCPLCRLKVTKPENISAEEWGKN LPSNHLIINVIDCERLNKEKLCNPCERENESEKATRWCVECRDLLCEKCVKTHAKFRFSMSHKVVSLSELTEESPIAKPN SSSVVSYCEKHQQKVLEAYCSDHRVTCCISCVTIEHRKCDNVGTIESVAEEVRKSKKLEDLEKFFLKSNDEIGKMIGTTK QNLENLSKQYDEYEQEIGKTFVRLQKLLENGKEQSLKELTAVRKEVEPKVESTRDEYVCQQSVISNCLNVIQHGLQFASD AQLLIEMQKLFEQKCNMEEYIQKERKHQRCYQLEFIEDKEISKVESKLQHLGTTKCLQTGMFMPDVSMLNGSSNFIRKLE VNSSYVFGGTILEDGRLLIPTFSKKTLELFSADGNSLSQLEFDGDTFDVDMDENCRHGVVSSWMGCWIALFELKNGKLVR KDLKQFQSCCGAVRYKNDQVFVACQKEIMIVNGYTGDSLRTLSLVVGEAQFLELDHINSMVYYSRYSEVNYVSFDGNENG VLLNKEAGIHRVASIVCDFEQNIYIIDQGAKSLKQFTRHKKFSRNIVKGLNNLYAARFMKNSNMFMISDGGDVMIYEII |
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