Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_692.1_07799
Locus scaffold692.1 : 20160 ... 37555 : -
To GenomeBrowser scaffold692.1:20160..37555
Genes list of scaffold scaffold692.1
Synonym pfu_aug1.0_10792.1_10205

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_692.1_07799.t1 gi|260788925|ref|XP_002589499.1| hypothetical protein BRAFLDRAFT_88358 [Branchiostoma floridae] 1.0e-31
pfu_aug2.0_692.1_07799.t1 gi|260833538|ref|XP_002611714.1| hypothetical protein BRAFLDRAFT_63595 [Branchiostoma floridae] 2.0e-24
pfu_aug2.0_692.1_07799.t1 gi|156366074|ref|XP_001626966.1| predicted protein [Nematostella vectensis] 2.0e-20

Transcript
Transcript IDpfu_aug2.0_692.1_07799.t1
Definition-
>pfu_aug2.0_692.1_07799.t1
atgcttgacaatgtggtttgcaatcagcaatggtcatatggttttgtatcttttacaatgcaacatgatgattgtggatg
tagaacatcacagacaaacaatggccatgtagttaaagatccgtgcttaccagggaaccacgatattctcaaagatctga
agcgtagtactttgtacaccataaaatctactgacccttacctatgtgatgacaacctgaaaccaggatgaccgtttctt
ccttcaggatctgaaagagtttgtgaggttggcaaagccatagtgaacggaacttgtccagatctttacccgaaactcct
caatttcccgaaactcgaaattccagaagttgtacagaacatcgttcgaatcccatgtaaaataccatataaaactggaa
taccggatgttggatttgaggtcacgtggacagtagataatcaaccattaaaggacccgacatccggaaaactcatcaac
actacattgactggtgattcaagaacggcatacctcgatgcgtctaagttacaaggaaatttagggaaagatgttagatg
cgtggtttcttcgtttcaccccagcagtcctcagtctaaaagcaaattgttacccagcaacgcatattgggctggcataa
gggtttccactggtgcaatagaagttgatgagtcaggagctgataaggagctgacacttgagtccactttaccaataata
tgtaacgcaatcaaccagaacgagtgtaagctgaccgtggaactccaccaaaacctggatcccacagctttgtttcactg
ggtgagtgcatggtgaacatacaatatttataaaactggagatttggttttgtacagatctaagaaccaaaagcgcccat
tcgaaatccaggtaagaacgtgggggtgcggaagatatcacccgtgtatctgcgcagtgatagcgagagaaggaaatgac
atcattgaaattgacatgtgcgaaaagcgcatgaacaaagttgcggcaccaactatgaaagtcttatccggacatcctct
agagggaacgacaatttggagggatagatctggcaagaatttttatgcaacctacgtcttgagaccccgtggaacgcacg
agagggacgggatgttgaatgtggcagtacaagcgcccactgatgacctcaaatcggctgaggggctttgtggaaactgg
gacgggaaggcctccacccaattccaaggaaagaatggtcacatatacaacagtcatcaaacgtcacagtttgctaatac
ttggttgctggcacacaaagaaagtctcttctacaatcttccaaaatatgaatctagtctaaaaccagaccacgagtact
gtgcatgtaaaaagtcaacggtagattgtcataagggaaacggagctaataatccaagtaaaaatgtttgctctggagga
aaatgtatcaagcccaaactacacactgcctcctacactgtacacaagggacgtagtctgcatagacgagattcaccaac
atttcatttgttgaacatgcccattcgaaacgccagttacccaacccctagtggcttgacggaggcaaaagcacgtgaaa
tgtgttacaactccattatgaaagcttctctgtaccaacgatgcaatagtgttccttctatgataaacagaacttcaagt
tttgttgacgcatgcgtggaagacatgaagataaaaatcatcaaaacaataagaaacaatctattcttcagagaaggaat
ttgtgataaaagaggtggtgtttgtgatgcaattaacctgatagctgataacataatagatattgacgccttgggatgca
aaattacccatctacacaatcaaacccaggatagccgttccagtgttgtttctcgtcatgtgaaagcagaatttgttagt
tttatggaggtttcttgtcctttaccaacggatctactgaaacaaggcgctatataccaggagttcaacgtatcaatgac
ggtggacggaattacttacagttccgaactttcgtatgtcgtttacgattcgcattgtctcgcttgtgaaaatgcggatc
attgcagaaatgaaatgaacagtacctgtataattgaccgaaggtgttacagaagaggtgaacaaaattctccaggactc
gtgtgtgacccaaaacattcaaaccaagactggactcctgtgcaggaggtcaaagaaattgattactacacagctagttt
ctctggatgcgcatgtccatatgacgaaagaagatttacctgcgcgtgctgtatgaacgacggatgtcagtgtggcaaga
cacagccaaaccaatgtagtccgtgtgatcaaatacaactgtgtgggaaatatcctcatcttttcccagctcctctgtaa

Protein
Protein IDpfu_aug2.0_692.1_07799.t1
Definition-
>pfu_aug2.0_692.1_07799.t1
MLDNVVCNQQWSYGFVSFTMQHDDCGCRTSQTNNGHVVKDPCLPGNHDILKDLKRSTLYTIKSTDPYLCDDNLKPGXPFL
PSGSERVCEVGKAIVNGTCPDLYPKLLNFPKLEIPEVVQNIVRIPCKIPYKTGIPDVGFEVTWTVDNQPLKDPTSGKLIN
TTLTGDSRTAYLDASKLQGNLGKDVRCVVSSFHPSSPQSKSKLLPSNAYWAGIRVSTGAIEVDESGADKELTLESTLPII
CNAINQNECKLTVELHQNLDPTALFHWVSAWXTYNIYKTGDLVLYRSKNQKRPFEIQVRTWGCGRYHPCICAVIAREGND
IIEIDMCEKRMNKVAAPTMKVLSGHPLEGTTIWRDRSGKNFYATYVLRPRGTHERDGMLNVAVQAPTDDLKSAEGLCGNW
DGKASTQFQGKNGHIYNSHQTSQFANTWLLAHKESLFYNLPKYESSLKPDHEYCACKKSTVDCHKGNGANNPSKNVCSGG
KCIKPKLHTASYTVHKGRSLHRRDSPTFHLLNMPIRNASYPTPSGLTEAKAREMCYNSIMKASLYQRCNSVPSMINRTSS
FVDACVEDMKIKIIKTIRNNLFFREGICDKRGGVCDAINLIADNIIDIDALGCKITHLHNQTQDSRSSVVSRHVKAEFVS
FMEVSCPLPTDLLKQGAIYQEFNVSMTVDGITYSSELSYVVYDSHCLACENADHCRNEMNSTCIIDRRCYRRGEQNSPGL
VCDPKHSNQDWTPVQEVKEIDYYTASFSGCACPYDERRFTCACCMNDGCQCGKTQPNQCSPCDQIQLCGKYPHLFPAPL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495