Gene
| Gene Model ID | pfu_aug2.0_692.1_07802 |
|---|---|
| Locus | scaffold692.1 : 66286 ... 69998 : + |
| To GenomeBrowser | scaffold692.1:66286..69998 |
| Genes list of scaffold | scaffold692.1 |
| Synonym | pfu_aug1.0_73122.1_63774 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_692.1_07802.t1 | 2 | 1 | HSP20 | 53 | 137 | 6.0e-35 | 119.1 | 3.5e-22 | 2.6e-18 | 65.7 |
| pfu_aug2.0_692.1_07802.t1 | 2 | 2 | HSP20 | 186 | 262 | 6.0e-35 | 119.1 | 2.5e-18 | 1.8e-14 | 53.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_692.1_07802.t1 | gi|524916507|ref|XP_005113030.1| | PREDICTED: small heat shock protein p36-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_692.1_07802.t1 | gi|675868090|ref|XP_009019605.1| | hypothetical protein HELRODRAFT_106514 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_692.1_07802.t1 | gi|676447226|ref|XP_009051338.1| | hypothetical protein LOTGIDRAFT_68082, partial [Lottia gigantea] | 3.0e-40 |
| pfu_aug2.0_692.1_07802.t1 | gi|684367830|ref|XP_009162641.1| | hypothetical protein T265_00573 [Opisthorchis viverrini] | 2.0e-28 |
| pfu_aug2.0_692.1_07802.t1 | gi|524906144|ref|XP_005108414.1| | PREDICTED: flocculation protein FLO11-like isoform X6 [Aplysia californica] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_692.1_07802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_692.1_07802.t1 atggaaatgaaaatggagaaaagaagaaaagaatgggatgatgagtttgagaaaattaggaacgaatttttcacattgaa gcctagtgagaaacttggcgggaccgtagataaggtagataaccttagtacggtttacgaaactgaggcgtctggacgca ggtttaaggttcgattcgatgtgagtgaatttcgaccggaggaaatacaagtgaaagttcaagataacaaattatcggtg gcagcgagacacgaagagaaaaacaacaaatcgtcggtaagtcgtgaatattgccgacaagttgacattcccgatgacgt agatcaagaacggcttcagtgcgtacttagtaaagatggcatcttgaccgtcgacggtccagtgaaaggaacgctgatca tcaaacgtgagaccatgcttcctatacaacacggtcctctctcccctcagcctacatcctttaatcaagtagccatgatt tcgccgacgcctgcgcgtcccttagaggtcgcaactcccgttaagaacccgattattacggagcctgacggaacacggaa attgcgcttatccgttgacgtcggtgaattcaaacccgatgaaatcgtggtgaagacagcggagcggaagttgatcgttc acgccgagcatgaagaaaaactttctggacgtacgatgcacaaggagtttaataaggaatatgaacttccggagagtgtt gatcaatcggcaattacggcgtacatcggcgaggaaggaaagctattcgttgaagcgcctttgaaaccnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaacaaaagcgatattcgattacgcaaagtcatga |
|
Protein
| Protein ID | pfu_aug2.0_692.1_07802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_692.1_07802.t1 MEMKMEKRRKEWDDEFEKIRNEFFTLKPSEKLGGTVDKVDNLSTVYETEASGRRFKVRFDVSEFRPEEIQVKVQDNKLSV AARHEEKNNKSSVSREYCRQVDIPDDVDQERLQCVLSKDGILTVDGPVKGTLIIKRETMLPIQHGPLSPQPTSFNQVAMI SPTPARPLEVATPVKNPIITEPDGTRKLRLSVDVGEFKPDEIVVKTAERKLIVHAEHEEKLSGRTMHKEFNKEYELPESV DQSAITAYIGEEGKLFVEAPLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTKAIFDYAKS |
|