Gene
| Gene Model ID | pfu_aug2.0_694.1_14472 |
|---|---|
| Locus | scaffold694.1 : 102568 ... 150975 : - |
| To GenomeBrowser | scaffold694.1:102568..150975 |
| Genes list of scaffold | scaffold694.1 |
| Synonym | pfu_aug1.0_40406.1_12412 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| isoform c | GO:0004930 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_694.1_14472.t1 | 1 | 1 | Ldl_recept_a | 150 | 186 | 4.9e-08 | 32.7 | 9.4e-11 | 1.7e-07 | 30.9 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 1 | LRR_1 | 234 | 245 | 2.9e-08 | 32.6 | 8.0 | 15000.0 | -3.3 |
| pfu_aug2.0_694.1_14472.t1 | 4 | 1 | LRR_8 | 247 | 283 | 3.9e-28 | 96.9 | 2.7e-07 | 0.00051 | 19.7 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 1 | LRR_4 | 248 | 287 | 3.6e-14 | 51.9 | 8.9e-09 | 1.7e-05 | 24.3 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 2 | LRR_1 | 248 | 270 | 2.9e-08 | 32.6 | 0.00048 | 0.9 | 9.8 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 2 | LRR_4 | 272 | 310 | 3.6e-14 | 51.9 | 1.0e-08 | 1.9e-05 | 24.1 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 3 | LRR_1 | 272 | 293 | 2.9e-08 | 32.6 | 0.0032 | 5.9 | 7.3 |
| pfu_aug2.0_694.1_14472.t1 | 4 | 2 | LRR_8 | 295 | 348 | 3.9e-28 | 96.9 | 1.6e-12 | 2.9e-09 | 36.5 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 3 | LRR_4 | 295 | 334 | 3.6e-14 | 51.9 | 4.9e-06 | 0.0091 | 15.6 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 4 | LRR_1 | 296 | 315 | 2.9e-08 | 32.6 | 0.0072 | 13.0 | 6.2 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 4 | LRR_4 | 320 | 347 | 3.6e-14 | 51.9 | 0.0025 | 4.7 | 6.9 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 5 | LRR_1 | 320 | 341 | 2.9e-08 | 32.6 | 0.0021 | 3.9 | 7.8 |
| pfu_aug2.0_694.1_14472.t1 | 4 | 3 | LRR_8 | 396 | 447 | 3.9e-28 | 96.9 | 2.1e-12 | 3.9e-09 | 36.1 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 5 | LRR_4 | 396 | 426 | 3.6e-14 | 51.9 | 0.0062 | 12.0 | 5.7 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 6 | LRR_1 | 396 | 406 | 2.9e-08 | 32.6 | 6.8 | 13000.0 | -2.9 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 6 | LRR_4 | 412 | 447 | 3.6e-14 | 51.9 | 4.0e-06 | 0.0073 | 15.8 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 7 | LRR_1 | 412 | 432 | 2.9e-08 | 32.6 | 0.0073 | 13.0 | 6.2 |
| pfu_aug2.0_694.1_14472.t1 | 7 | 7 | LRR_4 | 436 | 473 | 3.6e-14 | 51.9 | 7.3e-07 | 0.0014 | 18.2 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 8 | LRR_1 | 436 | 452 | 2.9e-08 | 32.6 | 0.12 | 230.0 | 2.5 |
| pfu_aug2.0_694.1_14472.t1 | 4 | 4 | LRR_8 | 445 | 486 | 3.9e-28 | 96.9 | 1.5e-06 | 0.0028 | 17.3 |
| pfu_aug2.0_694.1_14472.t1 | 9 | 9 | LRR_1 | 461 | 481 | 2.9e-08 | 32.6 | 0.035 | 64.0 | 4.1 |
| pfu_aug2.0_694.1_14472.t1 | 1 | 1 | 7tm_1 | 538 | 766 | 5.1e-26 | 91.3 | 5.0e-29 | 9.3e-26 | 90.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_694.1_14472.t1 | gi|751445924|ref|XP_011177028.1| | PREDICTED: relaxin receptor 2 [Bactrocera cucurbitae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_694.1_14472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_694.1_14472.t1 atgcaggctagaacaaccgccccggcatatttcttcaaaaagagcttgtcgccccggcatatttcttcaaaaagagcttg tagcgcaataaatgattcattatcaataaacgaaacgaaacgtcgaactctgctattagaactctgctgtcagaactctg ctgtcagaactctgctgttagaactctgctgtcagacctctgctgtccgaactctgctgttagaactctgctgtcagaac tctgctgtcggaactctgctgtcagacctctgctgtcagaactcagctgtcagaactctgctgttagaattttgctgtca gaactctgctgtcagaactctgcttcattctagatacggtgtaccagacatgcatgtttcggctatacgtttatggtttt tgtccttttatagactaccggttgatggaaaaattgtggtagctgatacatgcagtcgtactgaatttgagtgcactaag tttccacagtgtatcgatgaaggaaaagtttgtgatctagtcaaagattgtaaggatggatcagatgaaaaactctgtcg tgatcgttaccaggatgatatatgggaccttacctatccaaagagaccggatgctgacagggaaataaagcaattatcat gtgagcttggtatacagacacctaactgttactgcctagaaagaaataaactctattgtaacaatgctggtttacgagaa ttcccatctggcatttcatccaatgtaactgttctagacttgtctggaaacagcattgaatatttaaccagaaatgatct aaattcactgtggaagcttgaaatgttatttatcagtaataacgaattgacggcaataacaaatagcacgttcggatcca atgaaaatctaaagaagttgaatttggttgacaacaagattcaccacatagaatgtactgcatttccagcaagtaataag ttagaagaactataccttgatcataacgcaatcagaactctcactaagagtatgtttaattgtctccatagactcagagt cttattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctggcaataaacttgta tccatagaagattttagtttctcaagccaaaataatgtacgatcattactcctctccaacaacaggctccgaaagctaca ggagaaatctttcgttgggctcgtaaacgtaacatatttatctttagaagggaatcacattataggaatcgaccagaaca cattcgtaccattgacatccatcaaatccctagatttgcgtaaaaatccttttactggttttggatacaacgcatttaac ggtctagaaaatctagatagtgggtactttgacgacttccacctgtgttcctacacgcctcatgtcaaatattgtgaacc attcagcgatggaatatctagcaaatacaacctccttgagaatgtattcctccgatttatggtttggatagtggccctgg tatcctgcgttggaaacgtggtagttttgtttggacgtgtttttcttcaggaagataatcggattcattctttctacatc agaagtctgtcaatggccgacatgtttatgggcatatatctatttatattaggatcacgtgacataaaataccgcgggat atatctgtactttgacaaagaatggcgtaaaagttttgaatgtgacatctgtggggttttgtgtacaatcagtaacgaag tgtccgtactgaccttggccttgataacctttgaccgatatgtgtcaatttgctatcctttacatggtaagaaaaacaat ttttgccgagcatatgtaacagttttcctcatttgggtcatagcggcaaatctgacaatcttaccattaaccggaatcga atattttggagcagacttttatggagacaattcggtgtgttttccattacatttacaccatccgtatgcgaaaggatggg agtattcgactttcattttccttgccatcaaccttgctgctttcactttcatttgttacgcctacacagcgatgttttac gcaatcaaaaactcaacaaaaatattacgatctcattttgacaatcaagagagaaacttagcgaaacgattctttttcat tgtgcttacagaccttttatgctgggctcctattatggttgttaaaatttgggctcttgcaggtcacgaggtcagtggta ccctctacggatgtcgtggtacccagatgtcgccctcatcgtcaatgtcttcgtcgtcctgtaggaagcttcatcaatca ggaactcatcacacgctggagagtgaccttaaggaagttggtagaagaactctccgatgtgcgtcagaacgaaaacactt cacctcctttaaggcagaaaggaaaagggcatcacaagattacctctgttttcggaatcgtcaagaatacatcagaagaa actgtagtagcacgaaaccgatctattcaagaacggactatcttcctttgcagaaaatgaattccgtttga |
|
Protein
| Protein ID | pfu_aug2.0_694.1_14472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_694.1_14472.t1 MQARTTAPAYFFKKSLSPRHISSKRACSAINDSLSINETKRRTLLLELCCQNSAVRTLLLELCCQTSAVRTLLLELCCQN SAVGTLLSDLCCQNSAVRTLLLEFCCQNSAVRTLLHSRYGVPDMHVSAIRLWFLSFYRLPVDGKIVVADTCSRTEFECTK FPQCIDEGKVCDLVKDCKDGSDEKLCRDRYQDDIWDLTYPKRPDADREIKQLSCELGIQTPNCYCLERNKLYCNNAGLRE FPSGISSNVTVLDLSGNSIEYLTRNDLNSLWKLEMLFISNNELTAITNSTFGSNENLKKLNLVDNKIHHIECTAFPASNK LEELYLDHNAIRTLTKSMFNCLHRLRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNKLV SIEDFSFSSQNNVRSLLLSNNRLRKLQEKSFVGLVNVTYLSLEGNHIIGIDQNTFVPLTSIKSLDLRKNPFTGFGYNAFN GLENLDSGYFDDFHLCSYTPHVKYCEPFSDGISSKYNLLENVFLRFMVWIVALVSCVGNVVVLFGRVFLQEDNRIHSFYI RSLSMADMFMGIYLFILGSRDIKYRGIYLYFDKEWRKSFECDICGVLCTISNEVSVLTLALITFDRYVSICYPLHGKKNN FCRAYVTVFLIWVIAANLTILPLTGIEYFGADFYGDNSVCFPLHLHHPYAKGWEYSTFIFLAINLAAFTFICYAYTAMFY AIKNSTKILRSHFDNQERNLAKRFFFIVLTDLLCWAPIMVVKIWALAGHEVSGTLYGCRGTQMSPSSSMSSSSCRKLHQS GTHHTLESDLKEVGRRTLRCASERKHFTSFKAERKRASQDYLCFRNRQEYIRRNCSSTKPIYSRTDYLPLQKMNSV |
|