Gene
| Gene Model ID | pfu_aug2.0_694.1_14476 |
|---|---|
| Locus | scaffold694.1 : 240747 ... 250884 : - |
| To GenomeBrowser | scaffold694.1:240747..250884 |
| Genes list of scaffold | scaffold694.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine-rich protein 1 | GO:0003680 GO:0005737 GO:0008270 GO:0008301 GO:0008630 GO:0010043 GO:0042277 GO:0071236 GO:0071493 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_694.1_14476.t1 | 1 | 1 | LIM | 4 | 60 | 1.4e-15 | 57.1 | 1.8e-18 | 1.5e-15 | 56.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_694.1_14476.t1 | gi|156359316|ref|XP_001624716.1| | predicted protein [Nematostella vectensis] | 2.0e-40 |
| pfu_aug2.0_694.1_14476.t1 | gi|392875150|gb|AFM86407.1| | cysteine-rich protein 1 [Callorhinchus milii] | 6.0e-40 |
| pfu_aug2.0_694.1_14476.t1 | gi|632951610|ref|XP_007891396.1| | PREDICTED: cysteine-rich protein 1 [Callorhinchus milii] | 8.99999e-40 |
| pfu_aug2.0_694.1_14476.t1 | gi|432936638|ref|XP_004082205.1| | PREDICTED: cysteine-rich protein 1 [Oryzias latipes] | 2.0e-39 |
| pfu_aug2.0_694.1_14476.t1 | gi|387914088|gb|AFK10653.1| | cysteine-rich protein 1 (intestinal) [Callorhinchus milii] | 4.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_694.1_14476.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_694.1_14476.t1 atgcctaagtgcccaagctgcggaaaggaggtgtattttgctgagaaagtgacgtcattgggaaaggactggcatcgccc atgtttgcgttgtgtgaaatgcaagaagaccctgacctctggtagccatgcagagcatgatggtaaaccgtactgccaca atccttgctatgcagcagagtttggacccgggggatttgggagaggtggcacagagagttacaaatactaa |
|
Protein
| Protein ID | pfu_aug2.0_694.1_14476.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_694.1_14476.t1 MPKCPSCGKEVYFAEKVTSLGKDWHRPCLRCVKCKKTLTSGSHAEHDGKPYCHNPCYAAEFGPGGFGRGGTESYKY |
|