Gene
| Gene Model ID | pfu_aug2.0_6942.1_09589 |
|---|---|
| Locus | scaffold6942.1 : 2476 ... 9786 : + |
| To GenomeBrowser | scaffold6942.1:2476..9786 |
| Genes list of scaffold | scaffold6942.1 |
| Synonym | pfu_aug1.0_2067.1_29963 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6942.1_09589.t1 | 1 | 1 | DUF3161 | 115 | 185 | 3.4e-06 | 26.8 | 3.1e-09 | 6.7e-06 | 25.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6942.1_09589.t1 | gi|676436270|ref|XP_009047827.1| | hypothetical protein LOTGIDRAFT_238294 [Lottia gigantea] | 3.99931e-42 |
| pfu_aug2.0_6942.1_09589.t1 | gi|524891308|ref|XP_005102189.1| | PREDICTED: spindle and kinetochore-associated protein 2-like isoform X1 [Aplysia californica] | 8.0e-38 |
| pfu_aug2.0_6942.1_09589.t1 | gi|390343830|ref|XP_003725973.1| | PREDICTED: spindle and kinetochore-associated protein 2 [Strongylocentrotus purpuratus] | 2.0e-34 |
| pfu_aug2.0_6942.1_09589.t1 | gi|542262782|ref|XP_005466176.1| | PREDICTED: spindle and kinetochore-associated protein 2-like isoform X2 [Oreochromis niloticus] | 1.0e-27 |
| pfu_aug2.0_6942.1_09589.t1 | gi|597793303|ref|XP_007259480.1| | PREDICTED: spindle and kinetochore-associated protein 2-like isoform X1 [Astyanax mexicanus] | 1.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_6942.1_09589.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6942.1_09589.t1 atggaacaaaccgtcgaaagggtggaagcaatgttcaaagagacagagtcagggatagattacttggcaagacgtgtgga aaatgaatttgaacatagcaaaaagggaggagatgcaaatccagcagctttattacggaacttagcagagataaagacag agtttaccagtctaacaaaagaggtccaagcaatacaacaagctcaaaaggaaacagtagactacatcaaagatcagttg accaccacatggggcttattacagaatctacagcagaacagtaacattcctaatgtatgttcatgtccagatgtatcccc atccagtaagagatcacattccgatgaattcatagagctcacacaggcagaattagactctgtatcaccgtctatacgtg gcagactcaaactcatggaagttaacatggtctacagaatattatggcgacatttcaaagaagaaaaaaacaggggacct ttaaatcagagtgatatgtacaaaatgggattgaaagtttcaggttcaaatggacaggccaaattaaaggtgctaaaagc attgaatctttgcacgctcacaaggaatatggaagtggaactggtgtga |
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Protein
| Protein ID | pfu_aug2.0_6942.1_09589.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6942.1_09589.t1 MEQTVERVEAMFKETESGIDYLARRVENEFEHSKKGGDANPAALLRNLAEIKTEFTSLTKEVQAIQQAQKETVDYIKDQL TTTWGLLQNLQQNSNIPNVCSCPDVSPSSKRSHSDEFIELTQAELDSVSPSIRGRLKLMEVNMVYRILWRHFKEEKNRGP LNQSDMYKMGLKVSGSNGQAKLKVLKALNLCTLTRNMEVELV |
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