Gene
| Gene Model ID | pfu_aug2.0_695.1_17740 |
|---|---|
| Locus | scaffold695.1 : 210695 ... 253278 : - |
| To GenomeBrowser | scaffold695.1:210695..253278 |
| Genes list of scaffold | scaffold695.1 |
| Synonym | pfu_aug1.0_10623.1_31944 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sushi domain-containing protein 2-like | GO:0005488 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_695.1_17740.t1 | 3 | 1 | AMOP | 112 | 144 | 0.0 | 217.9 | 1.6 | 2000.0 | -1.4 |
| pfu_aug2.0_695.1_17740.t1 | 3 | 1 | DUF4448 | 203 | 266 | 6.3e-06 | 25.8 | 0.19 | 230.0 | 1.1 |
| pfu_aug2.0_695.1_17740.t1 | 3 | 2 | AMOP | 301 | 449 | 0.0 | 217.9 | 8.4e-35 | 1.0e-31 | 109.9 |
| pfu_aug2.0_695.1_17740.t1 | 1 | 1 | NIDO | 970 | 1043 | 5.5e-09 | 36.6 | 2.0e-11 | 2.5e-08 | 34.4 |
| pfu_aug2.0_695.1_17740.t1 | 3 | 2 | DUF4448 | 1114 | 1152 | 6.3e-06 | 25.8 | 0.9 | 1100.0 | -1.1 |
| pfu_aug2.0_695.1_17740.t1 | 3 | 3 | AMOP | 1186 | 1337 | 0.0 | 217.9 | 8.7e-37 | 1.1e-33 | 116.3 |
| pfu_aug2.0_695.1_17740.t1 | 3 | 3 | DUF4448 | 1505 | 1549 | 6.3e-06 | 25.8 | 2.1e-07 | 0.00027 | 20.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_695.1_17740.t1 | gi|119580046|gb|EAW59642.1| | sushi domain containing 2, isoform CRA_b [Homo sapiens] | 0.0 |
| pfu_aug2.0_695.1_17740.t1 | gi|573905290|ref|XP_006640366.1| | PREDICTED: sushi domain-containing protein 2-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_695.1_17740.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_695.1_17740.t1 atactttgtatatcaaacaacaatacgctgggatgtttggtgggaaaatgatagattttaacggaccatgtttggctaca agcagcaagattaagtgtaaatttggacataattctggagaaaggactacaactggaataatggtcaatagtatgagagg gcgatgtctagtaccaacattactggagcgtggcagggtccctgtgagtgtatctgtcaatgatggattcagttattact tttcgtcagaactgacaatagtaaggattaaaaacaaaggaggggatctccaacaacaccaggttgcggcacccacagca aaacaccgaatacaaaaactcagagcagacaagcacagaaagagacgcaaaagggacaaggaacgtcaacgctcagaaca gaaacatcaaacacaaaggactactcataaacaaacgagacaacgggcaaccggtgccaacagtacaatcgaatactcta gtttgcatttacctctagtacatccaagtcggatgcccagtatgttatcaaatggaaaaggatggaatgaaacgacgtct acgtcactgagtatgagttggcatcctgatgatttgaccagtgtatcaagtgccttggtggatgttaacttagtaggata taaagaaactctagtaagatcctcatgggataatttactgaccatatcacaagggatacctgtaagtcaaggacaattta cattcaatgtcaaggacgcactgtgtaacgaagactgctcttcttatgaaataggcttcgttcaaatcaaacttcacaat atgtccttggctacatcacacggatttctagtcagcagtatcctaccattaggatttctaatgaacactagaatgaccca aaagtacggtgctaactggctacatgataaatgcatagcctggtacaacaaggatagcaaagacacttcatggctaaccg ctatacctagttgtccgtgtaatttacagcatgccttagtggatataggaaattggcagccagatcttgggtgtaatttg ttctccaagagagatggaaattgcctcttccaccaaaaagctgttcattgtgtcctagctgtgcaaccaacaatgcataa taaagatggcgcaggtaatcagtgttgctactcccaaaatggactgttgctatttgctgccgacacgttctatggaagta cgccagacagaagtcattcctggggagcgtatccgtatgtacaacctaattacgtcccaattacgtcacacggacttcat gacgtcatttcatttttctattgttgtttatgggtggattataaagactgtgattattacatggacagcagacctacaag ggattgtaaaaattatataccaccaaaacaagccatggtatatggtctatcacacgtgatgacgtttgatggatcctcat atcgtgtgtgtggagagggagactttgtgttattaaaatcgttggagatgacgatagaagggagatttcagaggtctaca ctcctaacaggaacacagaacaaaagtgttatactgaccgatgttggaataaaattcaatgcagaaaaagtagaactcag acttagaggctcggatatggacagatcacaaagacttgtggatgtacttgtcaatgataaattcgtcctttttgatcaaa ttcctatgagatggcaggactttaaaggggcgatcaaagaaaagaagaattcaattttacctttcacccttctggctatc aatgactccagtatgtgtaatgtacctatgtccggcactagctatagtttctgcggagggaataaagactgtgaatttga catgtgggagaccaacaacagaacgttagccttagcaacaaaatctagtagcgaaagatacgctgaaatagacagtttta ctcaacctggcagcacagtgacagtcactgattgtagggtaggaacattgagtggggatactacctacacatgtacagct aatggtgaagagaaacaacaatggagtcctgcagttactgcaagctgtgcagctcagttacctttatactcagaggatgg aagtacacagcttacccaaagtacacagcaagttaatctgccctcaggagttaccttccctttcttcggaaaaatctaca acgccctctatgtatccaaagacggattagtcgggttctcacctcaagctgcgtacaagaatactgtatactctaagtac cagacccagtatgtagcctctaacgattacccctttgctgcagccttccattttgcggctgtttctcatggctctgttac atctgctggagaaacctaccgaggagttacgaagtacagacaaattctttcagccaatgaggaaagtcgtaacatttcaa atttcatacgagcagcgtttcccggtcaggaccagttccaagctacgtacgtcctcgtggttacgtggagagatgtattt gacttgagggaacagtctgtagtaaactgtcagtaccagacgggaccaaatatatgtaaggtatccaaagacggattagt cgggttctcacctcaagctgcgtacaagaatactgtatactctaagtaccagactcagtatgtagcctctaacgattacc cctttgctgcagccttccattttgcggctgcttctcttggctctgttacatcagctggtgaaacctaccgaggagttacg aggtacagacaaattctttcagccaatgaggaaagtcgtaacatttcaaatttcatacgagcagcgtttcccggtcagga ccagttccaagctacgtacgtcctcgtggttacgtggagagatgtatttgacttgagggaacagtctgtagtaaactgtc agtaccagacgggaccaaatatatgtaagacaaacacgttccaacaagtgatggtgacagatggatcatcaagctttgca atatttaattatctgaaaactgacgtcaaaacctcccctacaacacaatcaggattcaacggcggaaatgggcgtggttg gtcagaagcaatcaaaagcggttcactacaaacggcaaatgcaagccaaggaagcgatgtagtgggacgatacgtgtacc agatagatgatactgttatatacaaaggagggtgtactccacaaaaatctaacatggagactttgtatatcaaacaacaa tacgctggtatgtttggtgggaaaatgatagattttaacggtccgtgtttggctacaaacaggaagattaagtgtaaatt tgggcacgatgcaggagaaaagactagcactggaataatgtcctcatgggataatttactgatcatatcacaagggatac gtgttagccaaggatcattcacattcaatgtcaaggacgcactgtgtaacgatgactgctcttcgtatgaaataggcatc gtgcaaatcaaactccaggatatgtccttagctacgtcacatggttttctggtcagcggaatcctaccactaggatttct aatgaatactaggatgacagaaaagtacggcgctaactggcctcatgataaatgcatagcctggtacaacaaggatagtg aagatacttcatggctgaccgccatccccaattgtccttgcaatctacaacaagccttagtggacattggaagttggcag gcagatcttgggtgtaacctattctctaacagagacggtaactgccgcttccaccatgaggccgttcattgtgtcagagc tgtacaacccgccatgcacaataaagatggtgcaggtaatcagtgttgctatgcacgaaacggtctgttgttatttgctg ccgacacattccaaggaagtacgcctgacagaagtcatgactggggagcgtccccgtatgtacaaccaaattacgtacca tctacgtcacactggttacatgacgtcatcactttctactattgctgtttgtgggtggattataaggactgtgattatta tatggacaatagagcgactagagactgcaaaaattatatgccaccaaaacaagccatggtttatggtttatcacacgtaa tgacgtttgatggatcctcgtaccgtgtgtgtggagagggagactttgtgttactcaaatcactagagatgacgatagaa gggcgatttcagaagtctaagttcctaacaggggcgatcaaagaaaagaagaactccattgtgcctttcacccttctagc tgtgaatgactccagtatgtgtaatgtacctatgtccggcactggctatggtttctgtggagggaataaagactgtgaat ttgacatgtgggagaccaacaaccgaacgtcatgtggactcctggacgtcccacgtagtagaaagtccagcaacaattat acactaggcagcacagtgacagtcactaactgtagggtgggaacattgagtggggacaccacctacacgtgtacagctaa cggtgaagaaaaacaacaatggagtcctacggttactgcaagctgtgcagacactctggaggacgcacagactacactca ttgttgcaatagtagttccagtagttgttgttttcgtcatcatcgtcataatcatcgctgtcatcatgaaaagaagatct ggaaaggtgaaaggggggaggaagcggatgggagtaaggagagagggggagggaggaaggggagggatggaaaagaagga gcgggaggaggcaggaaaggggacgggagggggaggtcaatggagatatctaagagttaagagagtccagaagaaatga |
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Protein
| Protein ID | pfu_aug2.0_695.1_17740.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_695.1_17740.t1 TLYIKQQYAGMFGGKMIDFNGPCLATSSKIKCKFGHNSGERTTTGIMVNSMRGRCLVPTLLERGRVPVSVSVNDGFSYYF SSELTIVRIKNKGGDLQQHQVAAPTAKHRIQKLRADKHRKRRKRDKERQRSEQKHQTQRTTHKQTRQRATGANSTIEYSS LHLPLVHPSRMPSMLSNGKGWNETTSTSLSMSWHPDDLTSVSSALVDVNLVGYKETLVRSSWDNLLTISQGIPVSQGQFT FNVKDALCNEDCSSYEIGFVQIKLHNMSLATSHGFLVSSILPLGFLMNTRMTQKYGANWLHDKCIAWYNKDSKDTSWLTA IPSCPCNLQHALVDIGNWQPDLGCNLFSKRDGNCLFHQKAVHCVLAVQPTMHNKDGAGNQCCYSQNGLLLFAADTFYGST PDRSHSWGAYPYVQPNYVPITSHGLHDVISFFYCCLWVDYKDCDYYMDSRPTRDCKNYIPPKQAMVYGLSHVMTFDGSSY RVCGEGDFVLLKSLEMTIEGRFQRSTLLTGTQNKSVILTDVGIKFNAEKVELRLRGSDMDRSQRLVDVLVNDKFVLFDQI PMRWQDFKGAIKEKKNSILPFTLLAINDSSMCNVPMSGTSYSFCGGNKDCEFDMWETNNRTLALATKSSSERYAEIDSFT QPGSTVTVTDCRVGTLSGDTTYTCTANGEEKQQWSPAVTASCAAQLPLYSEDGSTQLTQSTQQVNLPSGVTFPFFGKIYN ALYVSKDGLVGFSPQAAYKNTVYSKYQTQYVASNDYPFAAAFHFAAVSHGSVTSAGETYRGVTKYRQILSANEESRNISN FIRAAFPGQDQFQATYVLVVTWRDVFDLREQSVVNCQYQTGPNICKVSKDGLVGFSPQAAYKNTVYSKYQTQYVASNDYP FAAAFHFAAASLGSVTSAGETYRGVTRYRQILSANEESRNISNFIRAAFPGQDQFQATYVLVVTWRDVFDLREQSVVNCQ YQTGPNICKTNTFQQVMVTDGSSSFAIFNYLKTDVKTSPTTQSGFNGGNGRGWSEAIKSGSLQTANASQGSDVVGRYVYQ IDDTVIYKGGCTPQKSNMETLYIKQQYAGMFGGKMIDFNGPCLATNRKIKCKFGHDAGEKTSTGIMSSWDNLLIISQGIR VSQGSFTFNVKDALCNDDCSSYEIGIVQIKLQDMSLATSHGFLVSGILPLGFLMNTRMTEKYGANWPHDKCIAWYNKDSE DTSWLTAIPNCPCNLQQALVDIGSWQADLGCNLFSNRDGNCRFHHEAVHCVRAVQPAMHNKDGAGNQCCYARNGLLLFAA DTFQGSTPDRSHDWGASPYVQPNYVPSTSHWLHDVITFYYCCLWVDYKDCDYYMDNRATRDCKNYMPPKQAMVYGLSHVM TFDGSSYRVCGEGDFVLLKSLEMTIEGRFQKSKFLTGAIKEKKNSIVPFTLLAVNDSSMCNVPMSGTGYGFCGGNKDCEF DMWETNNRTSCGLLDVPRSRKSSNNYTLGSTVTVTNCRVGTLSGDTTYTCTANGEEKQQWSPTVTASCADTLEDAQTTLI VAIVVPVVVVFVIIVIIIAVIMKRRSGKVKGGRKRMGVRREGEGGRGGMEKKEREEAGKGTGGGGQWRYLRVKRVQKK |
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