Gene
| Gene Model ID | pfu_aug2.0_7.1_23215 |
|---|---|
| Locus | scaffold7.1 : 591432 ... 601203 : + |
| To GenomeBrowser | scaffold7.1:591432..601203 |
| Genes list of scaffold | scaffold7.1 |
| Synonym | pfu_aug1.0_7763.1_24276 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7.1_23215.t1 | 2 | 1 | Fra10Ac1 | 65 | 65 | 0.0 | 180.6 | 0.58 | 4300.0 | -2.3 |
| pfu_aug2.0_7.1_23215.t1 | 2 | 2 | Fra10Ac1 | 104 | 221 | 0.0 | 180.6 | 0.0 | 0.0 | 180.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7.1_23215.t1 | gi|524912560|ref|XP_005111126.1| | PREDICTED: protein FRA10AC1 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_7.1_23215.t1 | gi|291227927|ref|XP_002733934.1| | PREDICTED: protein FRA10AC1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_7.1_23215.t1 | gi|573884543|ref|XP_006630353.1| | PREDICTED: protein FRA10AC1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_7.1_23215.t1 | gi|637325047|ref|XP_008113535.1| | PREDICTED: protein FRA10AC1 isoform X2 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_7.1_23215.t1 | gi|556963310|ref|XP_005991631.1| | PREDICTED: protein FRA10AC1 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7.1_23215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7.1_23215.t1 atggcagagaggatagatttttcagagattcacaatgcaggtggttatgggtctgaatttgaatatgacagtgaagtaga gaggagacggaaaaagcagacagatttgatttcaaagaagaagcgtacaacagatggtgttgggcatagaaaagagctgg aagatgagtatgacaaggaggaagggaaaatacaacgttaccagatccttagcatggatgcttatgccaggcataaaaag tttattaatgactacatgctgtattatggcggatcaaaaacagaattcaagagagactcatctcgagataagacagatat ggatgttatcagagaaaatcacaggtttctgtggacggaggatgatgaagaagaaagttcttgggagaaaaccctagcaa agaaatattatgataagttgttcaaggaatactgtattacagatctcagtaggtacaaggaaaataaggtggcaatgaga tggagaacagaaaaggaggtgatggagggaaaaggtcaattttcttgtggtagtagaaagtgtaatgaaagagaaggttt aaggagctgggaggtcaactttggatatgtagagcatggagaaaagaaaaatgccttagttaaactacggctgtgtcctg attgttcttacaaactgaattatcaccataggaagaaggaagttttaccaaagtcaaagaagagaaggaaagatgaatca ttagatgatagacaaacacacaaaaaacaaaaatctcatcattcttctgtatcagatgataaatcaccaaaatcctccag tacatctagtcagaaagaaccatcctcctcctcctcaaaaacagaagatacagagaagtcaatatggagtggtccagcga aaataacggaagaaaaatcacggtttgtatcaaaattaagcaagcaattcagaattcttgcaaaatttgcatactggtat acaaccaaaagtagattatatccctaa |
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Protein
| Protein ID | pfu_aug2.0_7.1_23215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7.1_23215.t1 MAERIDFSEIHNAGGYGSEFEYDSEVERRRKKQTDLISKKKRTTDGVGHRKELEDEYDKEEGKIQRYQILSMDAYARHKK FINDYMLYYGGSKTEFKRDSSRDKTDMDVIRENHRFLWTEDDEEESSWEKTLAKKYYDKLFKEYCITDLSRYKENKVAMR WRTEKEVMEGKGQFSCGSRKCNEREGLRSWEVNFGYVEHGEKKNALVKLRLCPDCSYKLNYHHRKKEVLPKSKKRRKDES LDDRQTHKKQKSHHSSVSDDKSPKSSSTSSQKEPSSSSSKTEDTEKSIWSGPAKITEEKSRFVSKLSKQFRILAKFAYWY TTKSRLYP |
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