Gene
| Gene Model ID | pfu_aug2.0_7.1_23217 |
|---|---|
| Locus | scaffold7.1 : 640161 ... 670221 : - |
| To GenomeBrowser | scaffold7.1:640161..670221 |
| Genes list of scaffold | scaffold7.1 |
| Synonym | pfu_aug1.0_1877.1_44167 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor coe3 isoform x3 | GO:0005488 GO:0006355 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7.1_23217.t2 | 1 | 1 | TIG | 226 | 306 | 2.4e-12 | 46.6 | 3.8e-16 | 5.6e-12 | 45.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7.1_23217.t2 | gi|642914636|ref|XP_008190293.1| | PREDICTED: transcription factor collier isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_7.1_23217.t2 | gi|617650405|ref|XP_007533768.1| | PREDICTED: transcription factor COE3 isoform X3 [Erinaceus europaeus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7.1_23217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7.1_23217.t1 atgtccggagcgaccgattccgctccagtgagaattaactctgtccaaacacctatgaaggaggaacctcataattctac acaggttaaccctgtacgaaactggatgcagcccacagtcgtagaccagggtggtggaagtgtcgggtttggccgtgcac atttcgagaagcagccaccaagcaatttaaggaaaagtaatttctttcatttcgtgttggctttatatgatagacagggg caacctattgaagtggaaaggactgcatttatagactttgtagaaaaagatcaggaggaacacggacaaaaaacaaataa tggaattcattacagattacaattattatttgcaaacggtcaagataaaaatccagagatgtgccgagtgctactcacac acgaggtcatgtgtagtcgatgttgtgacaaaaagagctgcggcaatcgtaacgagaccccatccgatcccgtcattata gacagatttttcttgaaattcttcatgaaatgtaaccaaaattgcctgaagaatgcggggaacccacgtgacatgaggcg cttccaggttgctatttgcacaacaatatcaatagatgatgcatggtttttggcggactcctacacgtcacgggcgtttt cccgctacccaagggatgcagggacaataactacaccgtgtataaaggcaatctgtccgagtgagggctggacgacaggg gggacgactgtaatcatcattggggataacttttttgatggacttcaggttgtgtttggcactatgttggtatggagtga gttgataacgtctcatgccatacgagtgcagacacctccccgtcacatcccgggggtggtggaggtaacgctctcctaca aatccaaacaattctgtaaaggtgctcctggcagatatgtctatactgctttgacagaacccaccatcgactacggcttc caaaggctgatgaagctcgtgccccgtcaccccggggatccagagagactccccaaggagattgttctaaaacgcgcagc cgatctcgcagaagctatttatagtggtatgcccaggaaccataatcaacttccgttaccccctccaagatcccccgcaa tgaataacgggtcacctatgtccagtttcaacgccccttactccggacaactagccgtcagcatccaagaaacgaatggc caatgggaagatggttatgcccgaggtcaggcttccagtgtttcgcccagggggtacggttcaaacggctcaacgccaca tagtaatggcagtagttatagctctacagcaatgaacggctaccacgcccctacagggggactaggaaatatgggaatga gcagtcttgtgacgtcaccgttttctgctgtgaatccgtttgcgttaccaacgtgcaatggacaaacttacggaagctca atatttctccagctaaatgatactctcattgtacttccggtaatgaaaatgaacaatcaaaagagtgctatatga |
|
| Transcript ID | pfu_aug2.0_7.1_23217.t2 |
| Definition | - |
>pfu_aug2.0_7.1_23217.t2 atgtccggagcgaccgattccgctccagtgagaattaactctgtccaaacacctatgaaggaggaacctcataattctac acaggttaaccctgtacgaaactggatgcagcccacagtcgtagaccagggtggtggaagtgtcgggtttggccgtgcac atttcgagaagcagccaccaagcaatttaaggaaaagtaatttctttcatttcgtgttggctttatatgatagacagggg caacctattgaagtggaaaggactgcatttatagactttgtagaaaaagatcaggaggaacacggacaaaaaacaaataa tggaattcattacagattacaattattatttgcaaacggtcaagataaaaatccagagatgtgccgagtgctactcacac acgaggtcatgtgtagtcgatgttgtgacaaaaagagctgcggcaatcgtaacgagaccccatccgatcccgtcattata gacagatttttcttgaaattcttcatgaaatgtaaccaaaattgcctgaagaatgcggggaacccacgtgacatgaggcg cttccaggttgctatttgcacaacaatatcaatagatgatgcatggtttttggcggactcctacacgtcacgggcgtttt cccgctacccaagggatgcagggacaataactacaccgtgtataaaggcaatctgtccgagtgagggctggacgacaggg gggacgactgtaatcatcattggggataacttttttgatggacttcaggttgtgtttggcactatgttggtatggagtga gttgataacgtctcatgccatacgagtgcagacacctccccgtcacatcccgggggtggtggaggtaacgctctcctaca aatccaaacaattctgtaaaggtgctcctggcagatatgtctatactgctttgacagaacccaccatcgactacggcttc caaaggctgatgaagctcgtgccccgtcaccccggggatccagagagactccccaaggagattgttctaaaacgcgcagc cgatctcgcagaagctatttatagtggtatgcccaggaaccataatcaacttccgttaccccctccaagatcccccgcaa tgaataacgggtcacctatgtccagtttcaacgccccttactccggacaactagccgtcagcatccaagaaacgaatggc caatgggaagatggttatgcccgaggtcaggcttccagtgtttcgcccagggggtacggttcaaacggctcaacgccaca tagtaatggcagtagttatagctctacagcaatgaacggctaccacgcccctacagggggactaggaaatatggttggtc cctcacaatcgcccaccttacccccttctgtgcccaattccggctttcatcaacagggaggcccggcgggcatattctct ttctctccagccaatatgatcaacgccgtcaaacagaaaagcgcctttgcccccgtggtgaagcccgggacagggtgtag cccacctatgggtggaatgcctgctgggtgggctcatccaattttaagtgaatga |
|
Protein
| Protein ID | pfu_aug2.0_7.1_23217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7.1_23217.t1 MSGATDSAPVRINSVQTPMKEEPHNSTQVNPVRNWMQPTVVDQGGGSVGFGRAHFEKQPPSNLRKSNFFHFVLALYDRQG QPIEVERTAFIDFVEKDQEEHGQKTNNGIHYRLQLLFANGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVII DRFFLKFFMKCNQNCLKNAGNPRDMRRFQVAICTTISIDDAWFLADSYTSRAFSRYPRDAGTITTPCIKAICPSEGWTTG GTTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRYVYTALTEPTIDYGF QRLMKLVPRHPGDPERLPKEIVLKRAADLAEAIYSGMPRNHNQLPLPPPRSPAMNNGSPMSSFNAPYSGQLAVSIQETNG QWEDGYARGQASSVSPRGYGSNGSTPHSNGSSYSSTAMNGYHAPTGGLGNMGMSSLVTSPFSAVNPFALPTCNGQTYGSS IFLQLNDTLIVLPVMKMNNQKSAI |
|
| Protein ID | pfu_aug2.0_7.1_23217.t2 |
| Definition | - |
>pfu_aug2.0_7.1_23217.t2 MSGATDSAPVRINSVQTPMKEEPHNSTQVNPVRNWMQPTVVDQGGGSVGFGRAHFEKQPPSNLRKSNFFHFVLALYDRQG QPIEVERTAFIDFVEKDQEEHGQKTNNGIHYRLQLLFANGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVII DRFFLKFFMKCNQNCLKNAGNPRDMRRFQVAICTTISIDDAWFLADSYTSRAFSRYPRDAGTITTPCIKAICPSEGWTTG GTTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRYVYTALTEPTIDYGF QRLMKLVPRHPGDPERLPKEIVLKRAADLAEAIYSGMPRNHNQLPLPPPRSPAMNNGSPMSSFNAPYSGQLAVSIQETNG QWEDGYARGQASSVSPRGYGSNGSTPHSNGSSYSSTAMNGYHAPTGGLGNMVGPSQSPTLPPSVPNSGFHQQGGPAGIFS FSPANMINAVKQKSAFAPVVKPGTGCSPPMGGMPAGWAHPILSE |
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