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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_7.1_23218
Locus scaffold7.1 : 675692 ... 704362 : +
To GenomeBrowser scaffold7.1:675692..704362
Genes list of scaffold scaffold7.1
Synonym pfu_aug1.0_14036.1_46703

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_7.1_23218.t1 1 1 DDE_3 50 119 7.0e-06 25.8 5.4e-10 8.0e-06 25.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_7.1_23218.t1 gi|749777622|ref|XP_011143624.1| PREDICTED: uncharacterized protein LOC105185666 isoform X2 [Harpegnathos saltator] 5.0e-08

Transcript
Transcript IDpfu_aug2.0_7.1_23218.t1
Definition-
>pfu_aug2.0_7.1_23218.t1
atggatataaaaagggggttcgaaatagagtctgcagcgagctcatgcgtgttatcactagagggatccgaccgacattc
cgagagggcagatggtcggggccctgtcctctctaaagaggttttggacagggcccgtcatgacagtcagtcagagtgca
agtccaacaaggttgtagattgttacgggaaaatattaaacttaagcgccgcggaaagctcactagttaaaggtgtgttg
ttccatcaggacaaaactcctgttcacaagtctgtcactgccatggctgccattcatgattgtggctttaatatgattga
acatccgccttattcacctgatcttcccaaaactgaaggcagctatttctggcacccacttttagtccgatga

Protein
Protein IDpfu_aug2.0_7.1_23218.t1
Definition-
>pfu_aug2.0_7.1_23218.t1
MDIKRGFEIESAASSCVLSLEGSDRHSERADGRGPVLSKEVLDRARHDSQSECKSNKVVDCYGKILNLSAAESSLVKGVL
FHQDKTPVHKSVTAMAAIHDCGFNMIEHPPYSPDLPKTEGSYFWHPLLVR

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