Gene
| Gene Model ID | pfu_aug2.0_701.1_04488 |
|---|---|
| Locus | scaffold701.1 : 96136 ... 100098 : + |
| To GenomeBrowser | scaffold701.1:96136..100098 |
| Genes list of scaffold | scaffold701.1 |
| Synonym | pfu_aug1.0_1526.1_07993 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_701.1_04488.t1 | 2 | 1 | HlyIII | 58 | 282 | 3.1e-30 | 105.2 | 1.6e-33 | 1.2e-29 | 103.3 |
| pfu_aug2.0_701.1_04488.t1 | 2 | 2 | HlyIII | 299 | 328 | 3.1e-30 | 105.2 | 0.014 | 100.0 | 2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_701.1_04488.t1 | gi|694848940|ref|XP_009465630.1| | PREDICTED: membrane progestin receptor beta [Nipponia nippon] | 0.0 |
| pfu_aug2.0_701.1_04488.t1 | gi|704525104|ref|XP_010084439.1| | PREDICTED: membrane progestin receptor beta [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_701.1_04488.t1 | gi|72058996|ref|XP_784040.1| | PREDICTED: membrane progestin receptor beta [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_701.1_04488.t1 | gi|291242644|ref|XP_002741216.1| | PREDICTED: membrane progestin receptor beta-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_701.1_04488.t1 | gi|704266818|ref|XP_010152794.1| | PREDICTED: membrane progestin receptor beta [Eurypyga helias] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_701.1_04488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_701.1_04488.t1 atgaagaaggttagagacctgttgctgtcatacatcagtgatgctcagcatctattacacaaacaaaggaccttcaaagt ctcggaggttcccgtgttgttccgggagcccagcgtattgaccggatacagagagatgaacaagccgttggcatactacc tactgagcacatttcagcttcacaacgagactttcaatatttggacacatcttgtggcattcattctggtcattataaaa ctttactcagcgtactatgccttggacgagtatgaggaatatcaacctgtgatactaggattcggcatctgctgcatgtt ttacaccttcctaagcactcttgctcacatgctacagacgaaatcggattttatgcattacacggtttaccatttggatt ttgcaggtattgggttctacatgctgggtacaagtattaacttgtactacgccagctgccacgctgagtattatccactt ttcgagatgtcattcttgccatttgtagtgataatgagttggtttgggtgcttttgttcttgcttcgctaaactgaagta cagacgaccttatccgttcacccgaaaactgtggaatatatgttctttcggaacacaaatcgtgtgtgttttttcactag ttattctacgatacgttgactgttacagagattctgaatgtactctagcatcgctcaatcaccataccagagtggtatcc cttgtgttgttgtcgatgttcttcttctgcagctttatacctgaaaaattttaccccggaaaatttgacattctcggaat gagccatcaactttttcatttcacaattgccgtggcaactctggaacaatttgatacggcaatagaggacattgtgggac atacccataaccttgtgagtcacaagccaaaggcttcctatatttatgcttctattattagttatgccgttcttgctact ataactgtattgatgttgacaccacgagtttgtaaaaggatagaagctgacagattgtttgaagagaagcaaagatga |
|
Protein
| Protein ID | pfu_aug2.0_701.1_04488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_701.1_04488.t1 MKKVRDLLLSYISDAQHLLHKQRTFKVSEVPVLFREPSVLTGYREMNKPLAYYLLSTFQLHNETFNIWTHLVAFILVIIK LYSAYYALDEYEEYQPVILGFGICCMFYTFLSTLAHMLQTKSDFMHYTVYHLDFAGIGFYMLGTSINLYYASCHAEYYPL FEMSFLPFVVIMSWFGCFCSCFAKLKYRRPYPFTRKLWNICSFGTQIVCVFSLVILRYVDCYRDSECTLASLNHHTRVVS LVLLSMFFFCSFIPEKFYPGKFDILGMSHQLFHFTIAVATLEQFDTAIEDIVGHTHNLVSHKPKASYIYASIISYAVLAT ITVLMLTPRVCKRIEADRLFEEKQR |
|