Gene
| Gene Model ID | pfu_aug2.0_701.1_04498 |
|---|---|
| Locus | scaffold701.1 : 231171 ... 236699 : - |
| To GenomeBrowser | scaffold701.1:231171..236699 |
| Genes list of scaffold | scaffold701.1 |
| Synonym | pfu_aug1.0_13598.1_53982 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_701.1_04498.t3 | 2 | 1 | Gal-bind_lectin | 2 | 40 | 0.0 | 160.4 | 2.6e-12 | 3.8e-08 | 32.7 |
| pfu_aug2.0_701.1_04498.t3 | 2 | 2 | Gal-bind_lectin | 107 | 241 | 0.0 | 160.4 | 3.80004e-41 | 5.7e-37 | 126.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_701.1_04498.t3 | gi|524891029|ref|XP_005102053.1| | PREDICTED: galectin-5-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_701.1_04498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_701.1_04498.t1 atggcatataacgctagcaccgtagtcaacccaccaataccctatgttggtggtataccagggggattgaaagttggtac ccagatcatcataaacgcaacgttaccttaccacgaaaaccagttttctatcaatttacaatgcggtccaaatctcaatc cgaagtccaacacagcgctgcactttaatcctagaccaaatgaggggtgtatcgtgaggaactcccttcagcaccactcc tggggcgccgaagaaagacacgggggttgtcctatcaacaagggacaaccatttgagattatcatactgtgtcagatgaa ccactataaggtgtccgttaacggtcggcatttctgtgattttcgtcatcgtatcgacagaaaccacgttaacacgttaa cggtagaaggcggtgttcaagttaacagtattagatttgatggtcatggaggtcatcaccatggacaccacggtcaccac catggacacggagtaggcggttttattggaaatgttgttggcggcgctattaaggcagctatggggccaccatcctaccc cgcgggtcaggttcatcccccacccccgtctggaggggcacctggacaacccatgtataatccgccagtacccctaacca cacagataccaggtggcttctatccagggagaatgatcttcatcagcggtgtacccaattttaacgcttctagattcaca ataaatctacagtgtgggccttacgagggtagtgacattgccctacactgtgacatgcgcctgagggtgggaggggacat gaacgtgatagtaaggaatagctgtcaaggaggtgggtggggagcagaggagagacatagtccatacttcccctttatgc ctaatgcaaattttgacatgataatcatggcagagggaaatcagtttaagattgctgtaaataatcaacatctgttagaa ttctatcatcgccttcagccactgacacgtatagacaccttattggtcaaaggtgatcttagactgacccaggtacgcat acagtga |
|
| Transcript ID | pfu_aug2.0_701.1_04498.t2 |
| Definition | - |
>pfu_aug2.0_701.1_04498.t2 atggcatataacgctagcaccgtagtcaacccaccaataccctatgttggtggtataccagggggattgaaagttggtac ccagatcatcataaacgcaacgttaccttaccacgaaaaccagttttctatcaatttacaatgcggtccaaatctcaatc cgaagtccaacacagcgctgcactttaatcctagaccaaatgaggggtgtatcgtgaggaactcccttcagcaccactcc tggggcgccgaagaaagacacgggggttgtcctatcaacaagggacaaccatttgagattatcatactgtgtcagatgaa ccactataaggtgtccgttaacggtcggcatttctgtgattttcgtcatcgtatcgacagaaaccacgttaacacgttaa cggtagaaggcggtgttcaagttaacagtattagatttgatggtcatggaggtcatcaccatggacaccacggtcaccac catggacacggagcagctatggggccaccatcctaccccgcgggtcaggttcatcccccacccccgtctggaggggcacc tggacaacccatgtataatccgccagtacccctaaccacacagataccaggtggcttctatccagggagaatgatcttca tcagcggtgtacccaattttaacgcttctagattcacaataaatctacagtgtgggccttacgagggtagtgacattgcc ctacactgtgacatgcgcctgagggtgggaggggacatgaacgtgatagtaaggaatagctgtcaaggaggtgggtgggg agcagaggagagacatagtccatacttcccctttatgcctaatgcaaattttgacatgataatcatggcagagggaaatc agtttaagattgctgtaaataatcaacatctgttagaattctatcatcgccttcagccactgacacgtatagacacctta ttggtcaaaggtgatcttagactgacccaggtacgcatacagtga |
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| Transcript ID | pfu_aug2.0_701.1_04498.t3 |
| Definition | - |
>pfu_aug2.0_701.1_04498.t3 atgaaccactataaggtgtccgttaacggtcggcatttctgtgattttcgtcatcgtatcgacagaaaccacgttaacac gttaacggtagaaggcggtgttcaagttaacagtattagatttgatggtcatggaggtcatcaccatggacaccacggtc accaccatggacacggagtaggcggttttattggaaatgttgttggcggcgctattaaggcagctatggggccaccatcc taccccgcgggtcaggttcatcccccacccccgtctggaggggcacctggacaacccatgtataatccgccagtacccct aaccacacagataccaggtggcttctatccagggagaatgatcttcatcagcggtgtacccaattttaacgcttctagat tcacaataaatctacagtgtgggccttacgagggtagtgacattgccctacactgtgacatgcgcctgagggtgggaggg gacatgaacgtgatagtaaggaatagctgtcaaggaggtgggtggggagcagaggagagacatagtccatacttcccctt tatgcctaatgcaaattttgacatgataatcatggcagagggaaatcagtttaagattgctgtaaataatcaacatctgt tagaattctatcatcgccttcagccactgacacgtatagacaccttattggtcaaaggtgatcttagactgacccaggta cgcatacagtga |
|
Protein
| Protein ID | pfu_aug2.0_701.1_04498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_701.1_04498.t1 MAYNASTVVNPPIPYVGGIPGGLKVGTQIIINATLPYHENQFSINLQCGPNLNPKSNTALHFNPRPNEGCIVRNSLQHHS WGAEERHGGCPINKGQPFEIIILCQMNHYKVSVNGRHFCDFRHRIDRNHVNTLTVEGGVQVNSIRFDGHGGHHHGHHGHH HGHGVGGFIGNVVGGAIKAAMGPPSYPAGQVHPPPPSGGAPGQPMYNPPVPLTTQIPGGFYPGRMIFISGVPNFNASRFT INLQCGPYEGSDIALHCDMRLRVGGDMNVIVRNSCQGGGWGAEERHSPYFPFMPNANFDMIIMAEGNQFKIAVNNQHLLE FYHRLQPLTRIDTLLVKGDLRLTQVRIQ |
|
| Protein ID | pfu_aug2.0_701.1_04498.t2 |
| Definition | - |
>pfu_aug2.0_701.1_04498.t2 MAYNASTVVNPPIPYVGGIPGGLKVGTQIIINATLPYHENQFSINLQCGPNLNPKSNTALHFNPRPNEGCIVRNSLQHHS WGAEERHGGCPINKGQPFEIIILCQMNHYKVSVNGRHFCDFRHRIDRNHVNTLTVEGGVQVNSIRFDGHGGHHHGHHGHH HGHGAAMGPPSYPAGQVHPPPPSGGAPGQPMYNPPVPLTTQIPGGFYPGRMIFISGVPNFNASRFTINLQCGPYEGSDIA LHCDMRLRVGGDMNVIVRNSCQGGGWGAEERHSPYFPFMPNANFDMIIMAEGNQFKIAVNNQHLLEFYHRLQPLTRIDTL LVKGDLRLTQVRIQ |
|
| Protein ID | pfu_aug2.0_701.1_04498.t3 |
| Definition | - |
>pfu_aug2.0_701.1_04498.t3 MNHYKVSVNGRHFCDFRHRIDRNHVNTLTVEGGVQVNSIRFDGHGGHHHGHHGHHHGHGVGGFIGNVVGGAIKAAMGPPS YPAGQVHPPPPSGGAPGQPMYNPPVPLTTQIPGGFYPGRMIFISGVPNFNASRFTINLQCGPYEGSDIALHCDMRLRVGG DMNVIVRNSCQGGGWGAEERHSPYFPFMPNANFDMIIMAEGNQFKIAVNNQHLLEFYHRLQPLTRIDTLLVKGDLRLTQV RIQ |
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