Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_7034.1_16236
Locus scaffold7034.1 : 1 ... 15782 : +
To GenomeBrowser scaffold7034.1:1..15782
Genes list of scaffold scaffold7034.1
Synonym pfu_aug1.0_2547.1_30158

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_7034.1_16236.t1 1 1 MOR2-PAG1_C 37 297 0.0 232.2 0.0 0.0 231.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_7034.1_16236.t1 gi|749777533|ref|XP_011143592.1| PREDICTED: protein furry isoform X1 [Harpegnathos saltator] 0.0
pfu_aug2.0_7034.1_16236.t1 gi|749777536|ref|XP_011143593.1| PREDICTED: protein furry isoform X2 [Harpegnathos saltator] 0.0
pfu_aug2.0_7034.1_16236.t1 gi|749777539|ref|XP_011143594.1| PREDICTED: protein furry isoform X3 [Harpegnathos saltator] 0.0

Transcript
Transcript IDpfu_aug2.0_7034.1_16236.t1
Definition-
>pfu_aug2.0_7034.1_16236.t1
atgatgtgcgtctacggagcagcaccgacattgaccgaatgaggaccaatattcctcggtcccgcagtgctcagtcactg
aagaacatggaacaagggggcaccgaggacaagatgacgatcgtagctcagatgttctggattgccgtgtcgttactcga
gtcggattacgagtatgagttctcattggctgtcagactactggagaagatacttcagcacatgcaacccgagagaaacg
aatgtcgagagaaacttgacaagatcctacaacagatcaaatggaataacttcccgggagtacagactcagttactgaag
ggttttacgtcagctgttactgcagatgtgacatggtcattgatgtcacgactgactgtcagtatttcgtcacctatcat
tgatcccacagaaaatctcggttttccgatcaacgtgattgccttgctgccgtactttgtccagaattatgagagtccaa
cacagaaatgcaaagatgctgccgatcatattgtccagatgtgttcgcaaaagtcagagcgcctgaacaatcttgccaca
gttatgtccctttacagtcacggtacattcggccgagacagcttccagtggacaaagtgtgtggtcaagtatctattaga
tgtttacgtgacagcaagctttagcatgatcagctttttggtagaggtactggagaagggtcccccgtcctaccagccac
ctgtcttccagattcttcactgtatggtacactatatagacctgatttctcctgcatcgtcagcgtacaactctgaattc
tttacagccattacaaaacatgttcagagttcccattggaaggaagctttgaagattttgaagcttgccgtcaggaattc
ggctacactcagcgagggatgtccgtccgctatcagcgcagccagtagtgaatacagcgcacacatgtcgcacacgtcgt
ttgcggaggcagaaatgttgttaccaaagaaacagttacctggtaggacattagatttttcggtggatctaaaggacctt
cccattatgggtagaaccattgttaacacggacatacacggccccatttctgatcctccgtccggagacagtcttccctc
gtctccaaccaggaaaggatccggggatagcgaatcatgctggaagagaccccaactatcacagacgagggtcagagaaa
ggcttacagagttactgaactgctatggacagaagaggctacctaagagcccctcagtgatattcagccaatccagtgac
acgttagatcaccaacagagtgtggtgtccagtggtgaagagacctccacagcggatggtggctcaagtgatgtaatgaa
tgagcccaatatgaatgacatcacccttaccatccgaggatttgatttcctggacaatgaactggaagattcagaggaca
gcagtttcttcccaacgttagacaacagacggcgctcgtacagtcctccggaacgtgacggggaaagacgatttggcagt
gtgccagatctgaagctgttggagaaagcagagaaaaccatttcaccgagtgacagcatcagtctcaaagaggatagaat
ctccgataatgagtcagaagaccagacagaggaagaagatgttattccttccaacctgccagggggaacaactatcgtgg
ttcagaatcccatcttggaggaacgacttcgatctagccctctgtccatatctacgtatagaggtccagggtttgaactc
tggtctgggcacatctttccctaccctactacatttgatggcttgagagagcctcaagaagaggtagaaccagggctgtt
gtgttgttgtggggttgaggaaacctcaaaatttgatgggtggttgaatgtggcagagctggttgtatcagcctggatag
ctcagtggttagagtgcttacctgcaggtatagaggtccagggtttgaactccggtctgggcacatcttttcctaccctg
tatacatgtatgaccattggctatatgcacatatttacctttgctactttcacagttggccttttacagcaaaagcacag
tctccatagtaacgccagtgacctagaccttgtggagataagttctagcacggcctctccgagcctctcccagtttcacg
gtgcctttctgtgtctgacactacagaatgacgaggtagaagacgtgtggaaatctcacattgatcagatcatgctggag
tcctctgcaacgctcacagtcaaaacatcacagatttttccgagactttatagg

Protein
Protein IDpfu_aug2.0_7034.1_16236.t1
Definition-
>pfu_aug2.0_7034.1_16236.t1
DVRLRSSTDIDRMRTNIPRSRSAQSLKNMEQGGTEDKMTIVAQMFWIAVSLLESDYEYEFSLAVRLLEKILQHMQPERNE
CREKLDKILQQIKWNNFPGVQTQLLKGFTSAVTADVTWSLMSRLTVSISSPIIDPTENLGFPINVIALLPYFVQNYESPT
QKCKDAADHIVQMCSQKSERLNNLATVMSLYSHGTFGRDSFQWTKCVVKYLLDVYVTASFSMISFLVEVLEKGPPSYQPP
VFQILHCMVHYIDLISPASSAYNSEFFTAITKHVQSSHWKEALKILKLAVRNSATLSEGCPSAISAASSEYSAHMSHTSF
AEAEMLLPKKQLPGRTLDFSVDLKDLPIMGRTIVNTDIHGPISDPPSGDSLPSSPTRKGSGDSESCWKRPQLSQTRVRER
LTELLNCYGQKRLPKSPSVIFSQSSDTLDHQQSVVSSGEETSTADGGSSDVMNEPNMNDITLTIRGFDFLDNELEDSEDS
SFFPTLDNRRRSYSPPERDGERRFGSVPDLKLLEKAEKTISPSDSISLKEDRISDNESEDQTEEEDVIPSNLPGGTTIVV
QNPILEERLRSSPLSISTYRGPGFELWSGHIFPYPTTFDGLREPQEEVEPGLLCCCGVEETSKFDGWLNVAELVVSAWIA
QWLECLPAGIEVQGLNSGLGTSFPTLYTCMTIGYMHIFTFATFTVGLLQQKHSLHSNASDLDLVEISSSTASPSLSQFHG
AFLCLTLQNDEVEDVWKSHIDQIMLESSATLTVKTSQIFPRLYR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495