Gene
| Gene Model ID | pfu_aug2.0_707.1_24321 |
|---|---|
| Locus | scaffold707.1 : 60593 ... 115985 : - |
| To GenomeBrowser | scaffold707.1:60593..115985 |
| Genes list of scaffold | scaffold707.1 |
| Synonym | pfu_aug1.0_4493.1_66991 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| camp-dependent protein kinase type i-alpha regulatory subunit | GO:0001707 GO:0004862 GO:0005737 GO:0005886 GO:0005952 GO:0008603 GO:0009887 GO:0030552 GO:0031588 GO:0031594 GO:0031625 GO:0034236 GO:0045214 GO:0060038 GO:2000480 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_707.1_24321.t2 | 3 | 1 | cNMP_binding | 35 | 44 | 4.00001e-41 | 138.7 | 0.077 | 570.0 | 0.4 |
| pfu_aug2.0_707.1_24321.t2 | 3 | 2 | cNMP_binding | 68 | 136 | 4.00001e-41 | 138.7 | 4.5e-21 | 3.3e-17 | 62.0 |
| pfu_aug2.0_707.1_24321.t2 | 3 | 3 | cNMP_binding | 174 | 261 | 4.00001e-41 | 138.7 | 2.7e-24 | 2.0e-20 | 72.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_707.1_24321.t2 | gi|74181379|dbj|BAE29965.1| | unnamed protein product [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_707.1_24321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24321.t1 atgggcaataagatcaggaaactgttaccaggcggatctaaggaggacgccgagggaggggtagaggggacctacagtgc caaaccctctgaaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgaaacacagggagggtccgtcgaaacacagggagagtc cgtcgaaacacagggagggtccgtaacccaacaagatcagcccaaagaagatgggacggggaagaaccagccccagggtg aagaaaaggcggcacccgatgtttctccttcagaagctgataaaactgtgatatcaaaaggcggagattcccccgtacaa gtttctgataatagcacagacaaacatgaagcagatagcatcaaggtatgcgttagtgacgacagtcagaaagagatcat aaatcgtgaaagtgaagcctcctcctccaaacccgatagtgaaggtgataatgggtccacggacgcagtggaggggaaca ccgtcagtaaatctgcccctgaaccagcccaaacgcaggtgagaaggtcactttaccttgtggtgcctaaagactataaa accatggcagccttgtcgaaagctatatccaggaatgttctcttctctcatttagacgacaatgaacgaagtgatatttt cgatgccatgtttcctgttcaccgccatgcaggggaagtgatcattcagcagggtgatgagggggacaacttctacgtca tcgaccagggagaagttgatgtttttgtaaatgatgagcatgtgacaacaataggagagggaggaagctttggtgaatta gcattaatctatggaacacctagagctgccaccgtcaaggcgaaaggtgatgttaaactatggggaattgatagggacag ttatagacgaattctaatgggtagcactataagaaaacggaagatgtatgaagaattcttaggaaaagtttcaatattag ataacttagacaaatgggagcgtttgaccgttgctgatgctttagaacctgtccagttcgaggacggtcaagaaattgtc cgtcagggcgaaccaggggatgatttctttataataacagagggtcaagctgctgtcttacagaaacgctcagagaatga ggagcctgttgaagtgggtcgtctctcaacctccgattactttggtgaaattgctttactgctggaccgtcccagagctg ctacagtggtgtctagaggacctcttaaatgtgttaaacttgatcgtgctagatttgaacgcgtgttgggaccttgctca gatatcttaaaaagaaacatttcgcaatacaatagttttgtttctttgtctgtatga |
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| Transcript ID | pfu_aug2.0_707.1_24321.t2 |
| Definition | - |
>pfu_aug2.0_707.1_24321.t2 atggcagccttgtcgaaagctatatccaggaatgttctcttctctcatttagacgacaatgaacgaagtgatattttcga tgccatgtttcctgttcaccgccatgcaggggaagtgatcattcagcagggattgcagtataacagtcaagcaaagcacg gcatatgttgtctgcattatgattgtcggatgtgtgtaacaggtgatgagggggacaacttctacgtcatcgaccaggga gaagttgatgtttttgtaaatgatgagcatgtgacaacaataggagagggaggaagctttggtgaattagcattaatcta tggaacacctagagctgccaccgtcaaggcgaaaggtgatgttaaactatggggaattgatagggacagttatagacgaa ttctaatgggtagcactataagaaaacggaagatgtatgaagaattcttaggaaaagtttcaatattagataacttagac aaatgggagcgtttgaccgttgctgatgctttagaacctgtccagttcgaggacggtcaagaaattgtccgtcagggcga accaggggatgatttctttataataacagagggtcaagctgctgtcttacagaaacgctcagagaatgaggagcctgttg aagtgggtcgtctctcaacctccgattactttggtgaaattgctttactgctggaccgtcccagagctgctacagtggtg tctagaggacctcttaaatgtgttaaacttgatcgtgctagatttgaacgcgtgttgggaccttgctcagatatcttaaa aagaaacatttcgcaatacaatagttttgtttctttgtctgtatga |
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Protein
| Protein ID | pfu_aug2.0_707.1_24321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24321.t1 MGNKIRKLLPGGSKEDAEGGVEGTYSAKPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXETQGGSVETQGESVETQGGSVTQQDQPKEDGTGKNQPQGEEKAAPDVSPSEADKTVISKGGDSPVQ VSDNSTDKHEADSIKVCVSDDSQKEIINRESEASSSKPDSEGDNGSTDAVEGNTVSKSAPEPAQTQVRRSLYLVVPKDYK TMAALSKAISRNVLFSHLDDNERSDIFDAMFPVHRHAGEVIIQQGDEGDNFYVIDQGEVDVFVNDEHVTTIGEGGSFGEL ALIYGTPRAATVKAKGDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLGKVSILDNLDKWERLTVADALEPVQFEDGQEIV RQGEPGDDFFIITEGQAAVLQKRSENEEPVEVGRLSTSDYFGEIALLLDRPRAATVVSRGPLKCVKLDRARFERVLGPCS DILKRNISQYNSFVSLSV |
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| Protein ID | pfu_aug2.0_707.1_24321.t2 |
| Definition | - |
>pfu_aug2.0_707.1_24321.t2 MAALSKAISRNVLFSHLDDNERSDIFDAMFPVHRHAGEVIIQQGLQYNSQAKHGICCLHYDCRMCVTGDEGDNFYVIDQG EVDVFVNDEHVTTIGEGGSFGELALIYGTPRAATVKAKGDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLGKVSILDNLD KWERLTVADALEPVQFEDGQEIVRQGEPGDDFFIITEGQAAVLQKRSENEEPVEVGRLSTSDYFGEIALLLDRPRAATVV SRGPLKCVKLDRARFERVLGPCSDILKRNISQYNSFVSLSV |
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