Gene
| Gene Model ID | pfu_aug2.0_707.1_24324 |
|---|---|
| Locus | scaffold707.1 : 143582 ... 156235 : - |
| To GenomeBrowser | scaffold707.1:143582..156235 |
| Genes list of scaffold | scaffold707.1 |
| Synonym | pfu_aug1.0_96452.1_35164 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| enzymatic polyprotein endonuclease reverse | GO:0003824 GO:0005488 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_707.1_24324.t1 | 1 | 1 | Coq4 | 33 | 129 | 1.6e-31 | 108.9 | 9.5e-35 | 2.8e-31 | 108.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_707.1_24324.t1 | gi|723705540|ref|XP_010322067.1| | PREDICTED: uncharacterized protein LOC104647914 [Solanum lycopersicum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_707.1_24324.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24324.t1 atgctggaggctcaggatcataacgcagatgatgatagaacatatgtggatgccaatggtcagatcagagagagacagct agagtatgacgaactttatgaaggacacatacctacaacaccattacagaaagttcttttgtcttttggatcagctggca tggctctgtatgacccatccagggatgatatgattgccaccctgggggagacgacaggatattgggcattgaagtggatg aaggagaagatggagcaagatgaagtgggaaggcagatcttacaagagcagcctctcatcaatacacaaactttaaatgt ggacaaattaggagaactgccggagggaacctttggaaaacaatactggaagtttttaagtaaaaatctcagagatgcaa atttgacactacagccaacaaaatgcaactttgcttgcagtcaggtacaatatttgggtcatatcatcagtaaagatgga atcatggtagatccacagaaaacacaggctatagattcttttcctacaccaaaatcagtcaaacaagtcaaatcttttct tggtgtttgtaactattacagaaaatttgtacaaaattacgcaaaaatagttacaccattgaccacactcacacgcaaag atacaaaatttcattgggaagagggtcaacaacatgcatttcaaacactgaagcagaaactcacatctgcacctatttta gtttatccagactttcagaaaccattcataatctctacagatgcatcagacacagctataggctttgtattgggacaaaa agacaacactggtcgtgaacatgcaatagcatatggtggtagacagttacacagagaagaaaagaaatggcatatttcag aaaaagagggtttgagtcttgttgaagcagtaaaacaatttaggccatatgttgcaaacacaaaattcacagtttacaca gacaacattgctctcaaatggttgaatgacatcagaaacatgaatgggagattaggtcgctggtctctttttctacaagg atttaattttgaaattaaacacaaaccaggggcaaataactccaatgcagacgggttatctaggagggattacacagtaa caacagttacacaacaagttaactcaatgacagaacaacatgacacaagtacaaacactttacaagtgacatttgcatac aaatacgaaaatgaacaacaagtctttgcattgaacccagtgtcagttacaaacaatactaacagtaacactcaaaatca acctagtgatgtagaggtcaatgacaaacttaagcagcttcagcagtcttgttctgactttgaggatgtctacaagtatt tagtgcagagagaggtcccagaggatgctggatcagccagacgtactgtagcagagtcccatacataccaagtgatcgat gatatattgtatcacctctaccaagatagaaacagaggggttcctagagatcaacggatcatcaaacaactagcagttcc cagagtgctacgtgatgacctgttgaaatcgtaccatgactctatcgctggaggtggtcaccaagccctgtgtgagttat tccaaataaccaaaaagaacacaacagcttaccaccctcagacaaatgcagcttgcgagaggatgaatagcttcatactg cagtccctcagagcctactgtaatggtaaccatgacaactggccagagttactaccttctatcatgatggcctacaggat gacaccagccactcaatccactggatactcaccattctacatgatgtttggacgtgagatgaggataccaatagatacag cactgattcctaaagacaacatgtcaaaagatcataaggatcatctccagaaagtcattaaaaatcttgaagtggctcgt cagattgcaacggagaacctcaaacgtcatcaggagaaatacaagaagcaacatgacaaaaaagctactgaacccaagta caaggtgctagacaaagtgatgctgtttgtacctaaagttccagttggtgtgcctcccaagcttcattccaggtggcaag gtccttactacattctagaaaaaggaccaaatcatacatataaattagcagactgcanagagatgaggataccaatagat acagcactgattcctaaagacaacatgtcaaaagatcataaggatcatctccagaaagtcattaaaaatcttgaagtggc tcgtcagattgcaacggagaacctcaaacgtcatcaggagaaatacaagaagcaacatgacaaaaaagctactgaaccca agtacaaggtgctagacaaagtgatgctgtttgtacctaaagttccagttggtgtgcctcccaagcttcattccaggtgg caaggtccttactacattctagaaaaaggaccaaatcatacatataaattagcagactgcagtaccaataaaactctgaa gacactcgtaaatgctgctagacttaagattttcaaggatccgagacaaaggacccaatatcaggctgatagtgacagtg acaccagtaatacctcatcatcatcatcagttgaaagccttcaaagtcaaggtcacagctcagatgactgctctgacagt gacacaaatgatgacggcatcacactatcaggatctcagggcgggcgacaaagtcagagaacgcacaatgttcaaagagc tcccaaacctgataaaaacataaaggacatcatacaagcaaagagacagaatggtatcacttggtacagggtcacatatg acaacaagaaaggcactgaatggagacaggcaccgtatgttcctgaggatcttaggagcaagttccatgtagagcgcaca atgaaaggacgcaaaaagaagccacagaagcttaagtacttgcagcaaggtcagaatcaagtaactgctaagtgcaacac ttcaacacaaacacaaagtttcacaccacaaacaatacaaggggcactcacacaaaacgtgacaaatgcttaccaacaaa atcaagttgtatcagtttcagagataagttgcaactcacaaaatactgacactcagcctcctcagacaacagtctctagt actgaatcacaggaattcataccagaaagacacataggcatggggcgggcccttactatagcattccacttaaaaaatgc atag |
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Protein
| Protein ID | pfu_aug2.0_707.1_24324.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24324.t1 MLEAQDHNADDDRTYVDANGQIRERQLEYDELYEGHIPTTPLQKVLLSFGSAGMALYDPSRDDMIATLGETTGYWALKWM KEKMEQDEVGRQILQEQPLINTQTLNVDKLGELPEGTFGKQYWKFLSKNLRDANLTLQPTKCNFACSQVQYLGHIISKDG IMVDPQKTQAIDSFPTPKSVKQVKSFLGVCNYYRKFVQNYAKIVTPLTTLTRKDTKFHWEEGQQHAFQTLKQKLTSAPIL VYPDFQKPFIISTDASDTAIGFVLGQKDNTGREHAIAYGGRQLHREEKKWHISEKEGLSLVEAVKQFRPYVANTKFTVYT DNIALKWLNDIRNMNGRLGRWSLFLQGFNFEIKHKPGANNSNADGLSRRDYTVTTVTQQVNSMTEQHDTSTNTLQVTFAY KYENEQQVFALNPVSVTNNTNSNTQNQPSDVEVNDKLKQLQQSCSDFEDVYKYLVQREVPEDAGSARRTVAESHTYQVID DILYHLYQDRNRGVPRDQRIIKQLAVPRVLRDDLLKSYHDSIAGGGHQALCELFQITKKNTTAYHPQTNAACERMNSFIL QSLRAYCNGNHDNWPELLPSIMMAYRMTPATQSTGYSPFYMMFGREMRIPIDTALIPKDNMSKDHKDHLQKVIKNLEVAR QIATENLKRHQEKYKKQHDKKATEPKYKVLDKVMLFVPKVPVGVPPKLHSRWQGPYYILEKGPNHTYKLADCXEMRIPID TALIPKDNMSKDHKDHLQKVIKNLEVARQIATENLKRHQEKYKKQHDKKATEPKYKVLDKVMLFVPKVPVGVPPKLHSRW QGPYYILEKGPNHTYKLADCSTNKTLKTLVNAARLKIFKDPRQRTQYQADSDSDTSNTSSSSSVESLQSQGHSSDDCSDS DTNDDGITLSGSQGGRQSQRTHNVQRAPKPDKNIKDIIQAKRQNGITWYRVTYDNKKGTEWRQAPYVPEDLRSKFHVERT MKGRKKKPQKLKYLQQGQNQVTAKCNTSTQTQSFTPQTIQGALTQNVTNAYQQNQVVSVSEISCNSQNTDTQPPQTTVSS TESQEFIPERHIGMGRALTIAFHLKNA |
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