Gene
| Gene Model ID | pfu_aug2.0_707.1_24327 |
|---|---|
| Locus | scaffold707.1 : 170456 ... 178097 : + |
| To GenomeBrowser | scaffold707.1:170456..178097 |
| Genes list of scaffold | scaffold707.1 |
| Synonym | pfu_aug1.0_2051.1_58749 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proteasome subunit beta type-1 | GO:0004298 GO:0005634 GO:0005737 GO:0005839 GO:0051603 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_707.1_24327.t1 | 1 | 1 | Proteasome | 28 | 218 | 2.7e-37 | 127.9 | 2.20004e-41 | 3.2e-37 | 127.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_707.1_24327.t1 | gi|676491240|ref|XP_009065531.1| | hypothetical protein LOTGIDRAFT_132853 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_707.1_24327.t1 | gi|156365620|ref|XP_001626742.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_707.1_24327.t1 | gi|260799786|ref|XP_002594865.1| | hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_707.1_24327.t1 | gi|126311312|ref|XP_001381658.1| | PREDICTED: proteasome subunit beta type-1 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_707.1_24327.t1 | gi|524877040|ref|XP_005095227.1| | PREDICTED: proteasome subunit beta type-1-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_707.1_24327.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24327.t1 atgagtatgctttgcgaaagatctatgaacgaagagagcagttatgctccaaaacaagcttatttcaatccgtatgcaat gaatggagggacagtgttagctatagctggggaggacttctctgtgatagcatccgacacacgactcagtcaaggattct ctatacattccagggacatgcctaaaacatacaaactcactggatctacggtattaggagcctgtggtttccatggtgat gttcttacccttacaaaagtccttcaagccagattaaagatatatgagcatgatcataacgagaagatgtctacaccagc catagctgccatgttgtctaccatgttatattaccgcagattttttccttattacgtgtataatattgttgctggtattg atgaccaaggtaaaggatgcgttttcagttttgatcctgtaggatcatatgaaagagaatcctacagagctggaggatca gccagtgctatgcttcaacctttactagataatcagattggctttaagaatcaagagaatgtgaccaaaacatctttatc acaggagaaagccgtcaatctagtaaaggatgtgttcatctcggcagcggagagggacatttatactggtgatgctattg taataaacgtcatcaccaaagatggtgttaaggaggaacgatttgaactgagaagagattag |
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Protein
| Protein ID | pfu_aug2.0_707.1_24327.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24327.t1 MSMLCERSMNEESSYAPKQAYFNPYAMNGGTVLAIAGEDFSVIASDTRLSQGFSIHSRDMPKTYKLTGSTVLGACGFHGD VLTLTKVLQARLKIYEHDHNEKMSTPAIAAMLSTMLYYRRFFPYYVYNIVAGIDDQGKGCVFSFDPVGSYERESYRAGGS ASAMLQPLLDNQIGFKNQENVTKTSLSQEKAVNLVKDVFISAAERDIYTGDAIVINVITKDGVKEERFELRRD |
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