Gene
| Gene Model ID | pfu_aug2.0_707.1_24329 |
|---|---|
| Locus | scaffold707.1 : 203180 ... 221918 : - |
| To GenomeBrowser | scaffold707.1:203180..221918 |
| Genes list of scaffold | scaffold707.1 |
| Synonym | pfu_aug1.0_30880.1_12034 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| toll-like receptor 2 type-1 | GO:0006952 GO:0006955 GO:0044763 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_707.1_24329.t1 | 12 | 1 | LRR_7 | 89 | 103 | 6.3e-09 | 34.5 | 0.0036 | 5.4 | 7.6 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 1 | LRR_4 | 89 | 131 | 4.4e-22 | 77.2 | 1.5e-07 | 0.00022 | 20.7 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 1 | LRR_8 | 89 | 139 | 7.0e-15 | 54.5 | 1.1e-06 | 0.0017 | 18.0 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 1 | LRR_1 | 90 | 113 | 2.2e-09 | 36.0 | 0.0049 | 7.3 | 7.0 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 2 | LRR_7 | 115 | 128 | 6.3e-09 | 34.5 | 1.3 | 1900.0 | -0.1 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 2 | LRR_4 | 136 | 156 | 4.4e-22 | 77.2 | 0.0013 | 1.9 | 8.2 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 3 | LRR_7 | 140 | 153 | 6.3e-09 | 34.5 | 0.17 | 250.0 | 2.6 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 2 | LRR_8 | 140 | 170 | 7.0e-15 | 54.5 | 0.0036 | 5.3 | 6.8 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 2 | LRR_1 | 141 | 158 | 2.2e-09 | 36.0 | 2.5 | 3700.0 | -1.2 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 3 | LRR_1 | 177 | 188 | 2.2e-09 | 36.0 | 4.4 | 6500.0 | -2.0 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 4 | LRR_7 | 268 | 278 | 6.3e-09 | 34.5 | 0.27 | 390.0 | 2.0 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 3 | LRR_4 | 268 | 277 | 4.4e-22 | 77.2 | 0.47 | 700.0 | 0.0 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 3 | LRR_8 | 268 | 277 | 7.0e-15 | 54.5 | 0.2 | 290.0 | 1.2 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 4 | LRR_8 | 268 | 278 | 7.0e-15 | 54.5 | 0.21 | 320.0 | 1.1 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 4 | LRR_1 | 268 | 277 | 2.2e-09 | 36.0 | 0.065 | 96.0 | 3.6 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 5 | LRR_7 | 299 | 313 | 6.3e-09 | 34.5 | 0.044 | 66.0 | 4.3 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 4 | LRR_4 | 300 | 336 | 4.4e-22 | 77.2 | 0.00049 | 0.73 | 9.5 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 5 | LRR_1 | 300 | 315 | 2.2e-09 | 36.0 | 0.0079 | 12.0 | 6.4 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 5 | LRR_8 | 301 | 358 | 7.0e-15 | 54.5 | 0.023 | 34.0 | 4.2 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 6 | LRR_7 | 325 | 336 | 6.3e-09 | 34.5 | 3.1 | 4600.0 | -1.2 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 6 | LRR_1 | 326 | 337 | 2.2e-09 | 36.0 | 1.6 | 2400.0 | -0.6 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 7 | LRR_7 | 350 | 359 | 6.3e-09 | 34.5 | 0.52 | 770.0 | 1.1 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 7 | LRR_1 | 351 | 358 | 2.2e-09 | 36.0 | 1.4 | 2100.0 | -0.5 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 8 | LRR_7 | 414 | 423 | 6.3e-09 | 34.5 | 5.0 | 7500.0 | -1.8 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 5 | LRR_4 | 414 | 441 | 4.4e-22 | 77.2 | 0.14 | 210.0 | 1.6 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 6 | LRR_8 | 414 | 422 | 7.0e-15 | 54.5 | 2.9 | 4300.0 | -2.5 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 8 | LRR_1 | 414 | 429 | 2.2e-09 | 36.0 | 0.32 | 480.0 | 1.5 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 7 | LRR_8 | 471 | 524 | 7.0e-15 | 54.5 | 1.3e-05 | 0.02 | 14.6 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 9 | LRR_7 | 485 | 496 | 6.3e-09 | 34.5 | 2.9 | 4300.0 | -1.1 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 9 | LRR_1 | 485 | 500 | 2.2e-09 | 36.0 | 0.31 | 470.0 | 1.5 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 6 | LRR_4 | 486 | 527 | 4.4e-22 | 77.2 | 4.7e-08 | 7.0e-05 | 22.3 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 10 | LRR_1 | 513 | 532 | 2.2e-09 | 36.0 | 0.00015 | 0.23 | 11.6 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 10 | LRR_7 | 513 | 527 | 6.3e-09 | 34.5 | 0.00035 | 0.52 | 10.7 |
| pfu_aug2.0_707.1_24329.t1 | 8 | 8 | LRR_8 | 513 | 571 | 7.0e-15 | 54.5 | 3.4e-11 | 5.0e-08 | 32.5 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 11 | LRR_7 | 537 | 553 | 6.3e-09 | 34.5 | 0.0022 | 3.3 | 8.3 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 11 | LRR_1 | 538 | 556 | 2.2e-09 | 36.0 | 0.00013 | 0.2 | 11.8 |
| pfu_aug2.0_707.1_24329.t1 | 7 | 7 | LRR_4 | 538 | 576 | 4.4e-22 | 77.2 | 1.3e-08 | 2.0e-05 | 24.1 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 12 | LRR_1 | 565 | 576 | 2.2e-09 | 36.0 | 0.4 | 590.0 | 1.2 |
| pfu_aug2.0_707.1_24329.t1 | 12 | 12 | LRR_7 | 566 | 573 | 6.3e-09 | 34.5 | 6.6 | 9800.0 | -2.2 |
| pfu_aug2.0_707.1_24329.t1 | 13 | 13 | LRR_1 | 590 | 605 | 2.2e-09 | 36.0 | 0.84 | 1200.0 | 0.2 |
| pfu_aug2.0_707.1_24329.t1 | 1 | 1 | TIR | 703 | 837 | 7.0e-22 | 77.3 | 9.4e-25 | 1.4e-21 | 76.4 |
| pfu_aug2.0_707.1_24329.t1 | 1 | 1 | TIR_2 | 703 | 811 | 1.1e-12 | 48.0 | 1.3e-15 | 1.9e-12 | 47.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_707.1_24329.t1 | gi|701420709|ref|XP_009973345.1| | PREDICTED: toll-like receptor 2, partial [Tyto alba] | 1.0e-29 |
| pfu_aug2.0_707.1_24329.t1 | gi|585647651|ref|XP_006814079.1| | PREDICTED: uncharacterized protein LOC102803639 [Saccoglossus kowalevskii] | 7.0e-29 |
| pfu_aug2.0_707.1_24329.t1 | gi|675406105|ref|XP_008931403.1| | PREDICTED: toll-like receptor 2 type-1 [Manacus vitellinus] | 8.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_707.1_24329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24329.t1 atggtaccagggatgaaatcagaacaactttcatacttgaccctgatcttcaggaagcatcttcctctcaccatggaatg tcagatgtcaagtttgggcattccagcatttgcggctcaaattgtatctcccacggaacattctctgacggagttacccc ttggtcttgtcactgtgattgtaggagagcaaacggaaccagcccatgatgacattggatggttgaggtacagcactggg agaaaagtagtttttctgccattaacgtcgcttagaaatcttagtctaggtaataacagactccaaacagacgcgcttga aaatctcaaggatttacctgatttgtactttcttgacattgcggaaaacagctacacgtcgctccaaaaagacgcttttg aaaatctcaaggatttacctaatttgtactttcttgacattgcggaaaacagctacacgtcgtatcctggatcatttgcg tataatggaaatcttcattcattaaaaatagacgtattccaagactttcgattcaacgacaatttttcaacccttcttaa tctatcaaatgtatattttcatccgagaacaacatttgcaatatacaatgattcattccaaggattccgtaattctccta tagttgaactgaaactaaattttcataggatggtttacgcgccaattggtgatggttttcttcgacccttccgacatctc aaaagattaaaagtggacctaagctatcattttgacatcatgaaagccttgaaagtgttgcacggtgtacgtcatatgga tttagatgtcttggacctcagtggaaacaactggaacattatgagacatgttcatcttacaaaagaagacgtcgataact tacttactatgtgtgtaacagagctcaatttgttcaataatagaataagttattttcccttctctaaatcattgggtagt ccattctttagatgcctggaaaaacttaacatggcttctaatacaatagtctggacatattttgaggcgtttaaccttgt gtactttccaaagctacgatatttggatctagcatcaatatcatatagaccccttgaaaattatcctagtgatttttcac agactcctgatgatatacttcagcataatctcggtgatatttctggcaaaaatgtataccctgattttctgcaacgcgtc aacctaacagtgaaaggacctttgccgctagaatacatgtatttagacatttctggaaccagtcttagaaaagaagtgat tcttcctttgctgtataagttaaacttcccgaaccttacgacagtaaaagccccaagtacatattttgctctatgtgaat acaatgtagagtttgaaacaagtttatccttcttcgacatgtcaggatggcagtgtaggaagatcaaaccaaaattcata caaagacacatacacttaactcatctttacatggccaactccaatataggacattacatcaacactaatcaggatccttt gatcagaggactacgaaagttaaaagttttagatctttctggcaatggcattgaaacccttttgagtgatttctttgaag accaaaaacattccttgaagattctttatctgagagacaacaagcttcagaccattccttcagcattggcacctcttcgt caaattcatctggttgacctaagaaataattatttcacgtatttcgacgaaatggaaagagaattacttgacatgtttga aaatactacattcgacttcaacggaaaccgattttcatgtagctgcatacacgaagagagtcttgtttggatacaaagga aacacaattttaaaaatctcttttgtcaagatggaatgaaaatgtccgattatataaaagatgttcggacttttcaaatc aattgcctgtctgaattctggttggacttttcagttgtgttactattgcttatgattataacaattgtcatggtagctat cggatatagaaacaaagctgttgttatttacctgtatctgatggcggcaaggcggataaaaaagcataggcatctagagg atgctagagacgcttatacgtatgacgtattcctgtcgtactcgcatttagattgtgattgggtgatcggttctcttttt caatatctcacacaagaactgtccttacaagtgtgcatgtatcagaaagactttattcccggtgaatctatagctgaaga gatcctccgaagtattgattcaagcagaaaatctgtcttcgttataaccagaaactttctagagagtaaatggagcatgt ttgaaatggaattagctagacaacatgtcttcatgaatgactctgatacaatattaatcattttgaaagatgacattcaa gtacacgagttaccgaatttgctgaagaaaatatggtggagaactgtctgcctacaatttccgaagaaagatgatccaga agaaatgatatatttttggagtagactttcaaaagttttcaacagagactag |
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Protein
| Protein ID | pfu_aug2.0_707.1_24329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_707.1_24329.t1 MVPGMKSEQLSYLTLIFRKHLPLTMECQMSSLGIPAFAAQIVSPTEHSLTELPLGLVTVIVGEQTEPAHDDIGWLRYSTG RKVVFLPLTSLRNLSLGNNRLQTDALENLKDLPDLYFLDIAENSYTSLQKDAFENLKDLPNLYFLDIAENSYTSYPGSFA YNGNLHSLKIDVFQDFRFNDNFSTLLNLSNVYFHPRTTFAIYNDSFQGFRNSPIVELKLNFHRMVYAPIGDGFLRPFRHL KRLKVDLSYHFDIMKALKVLHGVRHMDLDVLDLSGNNWNIMRHVHLTKEDVDNLLTMCVTELNLFNNRISYFPFSKSLGS PFFRCLEKLNMASNTIVWTYFEAFNLVYFPKLRYLDLASISYRPLENYPSDFSQTPDDILQHNLGDISGKNVYPDFLQRV NLTVKGPLPLEYMYLDISGTSLRKEVILPLLYKLNFPNLTTVKAPSTYFALCEYNVEFETSLSFFDMSGWQCRKIKPKFI QRHIHLTHLYMANSNIGHYINTNQDPLIRGLRKLKVLDLSGNGIETLLSDFFEDQKHSLKILYLRDNKLQTIPSALAPLR QIHLVDLRNNYFTYFDEMERELLDMFENTTFDFNGNRFSCSCIHEESLVWIQRKHNFKNLFCQDGMKMSDYIKDVRTFQI NCLSEFWLDFSVVLLLLMIITIVMVAIGYRNKAVVIYLYLMAARRIKKHRHLEDARDAYTYDVFLSYSHLDCDWVIGSLF QYLTQELSLQVCMYQKDFIPGESIAEEILRSIDSSRKSVFVITRNFLESKWSMFEMELARQHVFMNDSDTILIILKDDIQ VHELPNLLKKIWWRTVCLQFPKKDDPEEMIYFWSRLSKVFNRD |
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