Gene
| Gene Model ID | pfu_aug2.0_709.1_31079 |
|---|---|
| Locus | scaffold709.1 : 60796 ... 87042 : + |
| To GenomeBrowser | scaffold709.1:60796..87042 |
| Genes list of scaffold | scaffold709.1 |
| Synonym | pfu_aug1.0_6144.1_02180 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_709.1_31079.t1 | 1 | 1 | zf-C4 | 12 | 79 | 7.4e-26 | 90.1 | 2.0e-29 | 1.5e-25 | 89.1 |
| pfu_aug2.0_709.1_31079.t1 | 1 | 1 | Hormone_recep | 672 | 833 | 2.6e-15 | 56.1 | 7.0e-19 | 5.2e-15 | 55.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_709.1_31079.t1 | gi|676433065|ref|XP_009046778.1| | hypothetical protein LOTGIDRAFT_138244 [Lottia gigantea] | 1.96182e-44 |
| pfu_aug2.0_709.1_31079.t1 | gi|676433062|ref|XP_009046777.1| | hypothetical protein LOTGIDRAFT_171961 [Lottia gigantea] | 6.0e-28 |
| pfu_aug2.0_709.1_31079.t1 | gi|676446884|ref|XP_009051226.1| | hypothetical protein LOTGIDRAFT_68173, partial [Lottia gigantea] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_709.1_31079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_709.1_31079.t1 atgccaccaggtgttgtacctttcccattcggcaagtgccgtgtatgtcgagatcgagctacaggagtgcattatggggt agcaacatgtgaaggctgcaagggattcttcaagaggagtacattaaggggagataaatacaaatgtttcttcggaggtc agtgtgatatcagtccacagaacagaaatcgttgtaaatcctgcagatttagacgctgtttggagagtgggatggcaata gatgctgtaaagatgggcaggattcccaaacttgagaaggaacgtgcattggcggaggctcgcatgaatgtcgaagagga cgttaacccacaaatcaacagcgtaacatctacaactagggatgtatctatggagaaatcagacaggtctcaacagagaa taagggtacagactgagcagggagctcacagcagcagccaaatgcacggggatgtcaacatgggtgaagatgaaaagcta ttacttaatcatcaaatacacatggactcctcaaaccctgacggctaccacaacatgcgatatgattactcacagtttca tcccagtatgggtcctaaggatatacctcatgcttctcaccagcaccagctgcactctgacggtcctaattctcatgccc cccagacgaccatgcaaatgtgccagcaatgggtcaactctcagtcatttagtgaagctgttcagattcccatgctcaga aatccagtgccgtcccattccaatcagcgtcaaatgggccgagagggtagctacattctacaaaatcccatggagagctc acatttgccgtctatgaatagaagtagtgaatttaattgtagaggaggtgatcaaggaaacttagttgaagtaaaaacgg aaattccatatcagtatgatttcactgggacaccgcttcacatgcaagcccattcatctcatcagtcattaataggtgat ggcacacatcaacatctatcaaatcctacatttcgacaatcatcacaagactttgaaaatgacgtattgcatagtggaac aagggtaaagcaaaagggagaaaatatgaataatacatcagccacatcagagagcatgacatttacaaatttggacttga aaatagggcagcatgaaaatagtatgccggaaaatacgaatgtgaatacaggggagggtgctcagcattctgatgtgtgt ctctcacctcccagaacaggttatagtccgactgttatcaaagttctcattaataaattcatggaagctaatcactcaat ggaaaaggaggaggaggcagagaaagtggagaataattctgtctccgccatgggggagatgaaaacggaaagtatcgaca gcagtgccctgcagagtgacagagaagttatcacagacggatttgtatggaaaaaatttgatacggcaaagaatcttcat caacctgttagtccacagcatatgatagagagaaaattaatggaaaatgctgacgacatcaggagtggtgatagtgaaag taaatctaaaactaatagtgtagcacagcgaactgaatctatctcatctgtccaagaagaaaacgtatgggaggactaca aattcctcaaggccatggttcctgatcctatctttggaaatttacctctccatgttcgcaatatggaaacgatgaaaaaa ctcggccaggagggcgtattggaaagattggtagaatttccaatcgatatgataatgtccatcgcagataaaatcaagaa tgccaaatctgacctgaaacctattaatagacatggcacagcattaggtcgcgagtcggaactgattgtacagagtacaa tggtacgactgaaacaagtggccaaagtattactggaacctttgtggcaaaaacggtgttatgtaaggcagtactggcaa ggcaggcaggaacaggccaagtttacgaccacagatcccgaggaaatggacggcatttgggcaactctcatgaaaagtgt cggtcattttaacgagattataataggtttttgcaaaaatgtccctggtttttctaaattgaattccaaactgaaagaat tcctggttgagagggtctactttgacatttggatgctgaactcctacgagtttatggtcgatgacacaagttacatggtg atgccagatgggagattttactcccgagaaacaatgatgtacatactcaaagaagagagagttaaggaacttctagacgt agcaggggatctgaacagttttcacctgacggacttggagctcatgttactttgtgtagtgcaattaacttgtccagata atatacccacagagataggattagacttggagcctctgagaattctcaaccttcattacctggatatcctggccaatgtg atctcacacaattacgggcaaaagtgcagcatgaaactcgtcaaaatattccagttcctaccaaagcttactaaactcac caataaactccggaaacaggtgtcaagttacgttgtggacgagctccctgatgatgaaaaactagaggacatttttcatg agtcagataaagtggagtga |
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Protein
| Protein ID | pfu_aug2.0_709.1_31079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_709.1_31079.t1 MPPGVVPFPFGKCRVCRDRATGVHYGVATCEGCKGFFKRSTLRGDKYKCFFGGQCDISPQNRNRCKSCRFRRCLESGMAI DAVKMGRIPKLEKERALAEARMNVEEDVNPQINSVTSTTRDVSMEKSDRSQQRIRVQTEQGAHSSSQMHGDVNMGEDEKL LLNHQIHMDSSNPDGYHNMRYDYSQFHPSMGPKDIPHASHQHQLHSDGPNSHAPQTTMQMCQQWVNSQSFSEAVQIPMLR NPVPSHSNQRQMGREGSYILQNPMESSHLPSMNRSSEFNCRGGDQGNLVEVKTEIPYQYDFTGTPLHMQAHSSHQSLIGD GTHQHLSNPTFRQSSQDFENDVLHSGTRVKQKGENMNNTSATSESMTFTNLDLKIGQHENSMPENTNVNTGEGAQHSDVC LSPPRTGYSPTVIKVLINKFMEANHSMEKEEEAEKVENNSVSAMGEMKTESIDSSALQSDREVITDGFVWKKFDTAKNLH QPVSPQHMIERKLMENADDIRSGDSESKSKTNSVAQRTESISSVQEENVWEDYKFLKAMVPDPIFGNLPLHVRNMETMKK LGQEGVLERLVEFPIDMIMSIADKIKNAKSDLKPINRHGTALGRESELIVQSTMVRLKQVAKVLLEPLWQKRCYVRQYWQ GRQEQAKFTTTDPEEMDGIWATLMKSVGHFNEIIIGFCKNVPGFSKLNSKLKEFLVERVYFDIWMLNSYEFMVDDTSYMV MPDGRFYSRETMMYILKEERVKELLDVAGDLNSFHLTDLELMLLCVVQLTCPDNIPTEIGLDLEPLRILNLHYLDILANV ISHNYGQKCSMKLVKIFQFLPKLTKLTNKLRKQVSSYVVDELPDDEKLEDIFHESDKVE |
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