Gene
| Gene Model ID | pfu_aug2.0_709.1_31082 |
|---|---|
| Locus | scaffold709.1 : 122461 ... 127305 : - |
| To GenomeBrowser | scaffold709.1:122461..127305 |
| Genes list of scaffold | scaffold709.1 |
| Synonym | pfu_aug1.0_41.1_50573 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_709.1_31082.t1 | 1 | 1 | C1q | 59 | 186 | 6.0e-22 | 78.0 | 1.5e-25 | 7.5e-22 | 77.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_709.1_31082.t1 | gi|597737989|ref|XP_007231223.1| | PREDICTED: complement C1q-like protein 2-like [Astyanax mexicanus] | 1.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_709.1_31082.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_709.1_31082.t1 atgtatcaactttgtatgtgtttgttcgtgtgcttcttggtagagaaaggctcaactagtttggctcgagaagtgtgtgg aaagggcatgcttacagcttttctacatcagaacaaagtgactggtaactgcctcaacacagttcggaatatcgttgaag agagaaagccagtagcattttatgcatacatgacagccccctttacaactaaaggccctgacacaaagctcatattcgac acagtgcgcaccaatgtccacaatgcttacgataagacaactggtgtgtacacggctccagagtctggaatgtacgtgtt caactgggtgatcagggagtacaaatctcaacattctgtggaactgatgttgaatagcgagatacttggagtcacgttta agagagcagaaggtaacgatgacgcctctgtgagtggaactgtggttgtcagcgtcaggaagggagattctgtttttctt cgcgctcaccataaggatgactctaaacacaaaatcaataacaatatacatggtccatcctcattcagtggatggcgttt gtgtggataa |
|
Protein
| Protein ID | pfu_aug2.0_709.1_31082.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_709.1_31082.t1 MYQLCMCLFVCFLVEKGSTSLAREVCGKGMLTAFLHQNKVTGNCLNTVRNIVEERKPVAFYAYMTAPFTTKGPDTKLIFD TVRTNVHNAYDKTTGVYTAPESGMYVFNWVIREYKSQHSVELMLNSEILGVTFKRAEGNDDASVSGTVVVSVRKGDSVFL RAHHKDDSKHKINNNIHGPSSFSGWRLCG |
|