Gene
| Gene Model ID | pfu_aug2.0_709.1_31087 |
|---|---|
| Locus | scaffold709.1 : 207962 ... 211656 : + |
| To GenomeBrowser | scaffold709.1:207962..211656 |
| Genes list of scaffold | scaffold709.1 |
| Synonym | pfu_aug1.0_27184.1_11831 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_709.1_31087.t1 | 7 | 1 | zf-H2C2_2 | 31 | 43 | 2.4e-11 | 43.3 | 0.00066 | 1.1 | 9.6 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 1 | zf-C2H2_jaz | 32 | 53 | 7.1e-07 | 29.1 | 1.3e-08 | 2.2e-05 | 24.4 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 1 | zf-C2H2 | 33 | 56 | 3.4e-18 | 64.8 | 3.9e-10 | 6.4e-07 | 29.3 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 1 | zf-C2H2_4 | 33 | 56 | 2.6e-09 | 36.7 | 3.2e-07 | 0.00052 | 20.1 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 1 | zf-C2H2_6 | 33 | 55 | 6.2e-06 | 25.9 | 0.0002 | 0.33 | 10.9 |
| pfu_aug2.0_709.1_31087.t1 | 7 | 2 | zf-H2C2_2 | 47 | 73 | 2.4e-11 | 43.3 | 8.8e-08 | 0.00014 | 21.9 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 2 | zf-C2H2 | 62 | 84 | 3.4e-18 | 64.8 | 2.9e-07 | 0.00048 | 20.3 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 2 | zf-C2H2_4 | 62 | 84 | 2.6e-09 | 36.7 | 4.2e-06 | 0.007 | 16.6 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 2 | zf-C2H2_jaz | 62 | 82 | 7.1e-07 | 29.1 | 1.9e-05 | 0.031 | 14.4 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 2 | zf-C2H2_6 | 62 | 75 | 6.2e-06 | 25.9 | 0.0012 | 1.9 | 8.5 |
| pfu_aug2.0_709.1_31087.t1 | 7 | 3 | zf-H2C2_2 | 77 | 100 | 2.4e-11 | 43.3 | 1.8e-07 | 0.00029 | 20.9 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 3 | zf-C2H2 | 90 | 112 | 3.4e-18 | 64.8 | 6.1e-06 | 0.01 | 16.1 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 3 | zf-C2H2_4 | 90 | 112 | 2.6e-09 | 36.7 | 0.00031 | 0.5 | 10.8 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 3 | zf-C2H2_6 | 90 | 112 | 6.2e-06 | 25.9 | 5.7e-05 | 0.093 | 12.6 |
| pfu_aug2.0_709.1_31087.t1 | 7 | 4 | zf-H2C2_2 | 107 | 130 | 2.4e-11 | 43.3 | 0.0077 | 13.0 | 6.3 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 3 | zf-C2H2_jaz | 118 | 138 | 7.1e-07 | 29.1 | 0.71 | 1200.0 | -0.2 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 4 | zf-C2H2 | 120 | 141 | 3.4e-18 | 64.8 | 3.0e-06 | 0.005 | 17.1 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 4 | zf-C2H2_4 | 120 | 139 | 2.6e-09 | 36.7 | 0.001 | 1.7 | 9.1 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 4 | zf-C2H2_6 | 120 | 140 | 6.2e-06 | 25.9 | 1.4e-05 | 0.023 | 14.6 |
| pfu_aug2.0_709.1_31087.t1 | 7 | 5 | zf-H2C2_2 | 134 | 140 | 2.4e-11 | 43.3 | 3.9 | 6500.0 | -2.3 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 4 | zf-C2H2_jaz | 197 | 206 | 7.1e-07 | 29.1 | 0.093 | 150.0 | 2.6 |
| pfu_aug2.0_709.1_31087.t1 | 7 | 6 | zf-H2C2_2 | 343 | 354 | 2.4e-11 | 43.3 | 0.6 | 990.0 | 0.3 |
| pfu_aug2.0_709.1_31087.t1 | 7 | 7 | zf-H2C2_2 | 445 | 455 | 2.4e-11 | 43.3 | 0.08 | 130.0 | 3.1 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 5 | zf-C2H2_jaz | 447 | 455 | 7.1e-07 | 29.1 | 0.88 | 1400.0 | -0.5 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 5 | zf-C2H2 | 448 | 456 | 3.4e-18 | 64.8 | 0.1 | 170.0 | 2.8 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 5 | zf-C2H2_4 | 448 | 455 | 2.6e-09 | 36.7 | 1.1 | 1800.0 | -0.4 |
| pfu_aug2.0_709.1_31087.t1 | 5 | 5 | zf-C2H2_6 | 448 | 455 | 6.2e-06 | 25.9 | 3.0 | 5000.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_709.1_31087.t1 | gi|260831678|ref|XP_002610785.1| | hypothetical protein BRAFLDRAFT_126318 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_709.1_31087.t1 | gi|554871908|ref|XP_005945903.1| | PREDICTED: PR domain zinc finger protein 16-like isoform X2 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_709.1_31087.t1 | gi|410899643|ref|XP_003963306.1| | 0.0 | |
| pfu_aug2.0_709.1_31087.t1 | gi|583980454|ref|XP_006785542.1| | PREDICTED: PR domain zinc finger protein 16-like isoform X5 [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_709.1_31087.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_709.1_31087.t1 atggaaggttgtataaagatggaatctcaatcaaccaatcagaattggggactgaaagaacttcataatcagatcaacca ggattttgacaggaaattttactgtgagaattgtgataaagttttcactgatcccagtaacctgcaaaggcacatccggg cacaacacgttggcgcgagaagtcatgcatgcagagaatgcgggaaaacattcgcgacatctagcggactgaagcaacac cagcacatacacagttctgtcaagcctttccagtgtgaggtctgcttgaaggcttacactcagttctctaatctgtgcag acacaaaaggatgcatgcagattgccggcagcaaataaaatgtaaagattgcggacaagctttctccacggttacgtccc ttagtaaacacaaacgattctgtgaaaattccttcaggggcgaagcacctatgcagcaagatggccagtcggaggatatt cgaaaaacttccgaggttcccttcccgcgagttttcaaaccggaagttatcagcatgcagagcgcgccattttctgtaca tcctttcttacactctcaataccagcttctgtcagagaatcaatatctcaatcatttacaatactttgactcaatctcgt ttttacggcaaatgtacccatctttatatcagagctggcatcaacattcacatctgttcggaaatgatataaactcaaat gaactgatgaagtataaacggaaggggtcgatggattccgaattaaactgttcacattccccagtgggtacttgtagcga ggcgtctagctttgaagcagatattgcttatccttgccgggaaaagagcacctcttatagaaatgatttatgtactgttg ataaatttgactgcctgtctcattctggtgagaatcatagtcctgaaatcaaagatgataaagatgtatcatacaaaaca gaaatggacagtacagacgacaattgtctcaattcaacgaataaacttcaatccgaagtgcctttagatcttacaaagca ttcaaaatccgaaacagtggaggaactacccaggaaaacacacatttttgggttcaaagaaaatccatgctcattcaagc ctgaagcctatatggacgatagtaatggcgaaaacatggaatcactaaaagtatcaaatatgaaactccagtttcagagc gaaaattctgcttttatttccccaaaactgaatgcattagatttgatgaactacgaatcacgatctttgacaagcttgtt ggcaatgggaaggtcacctgaacgctttcatatgagcaatagtttcaaaatcaaggaaagatacagttgcaaattttgcg gaaagtgccaacctgacccgccatttacggacccacacaggggagcagccatacaagtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_709.1_31087.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_709.1_31087.t1 MEGCIKMESQSTNQNWGLKELHNQINQDFDRKFYCENCDKVFTDPSNLQRHIRAQHVGARSHACRECGKTFATSSGLKQH QHIHSSVKPFQCEVCLKAYTQFSNLCRHKRMHADCRQQIKCKDCGQAFSTVTSLSKHKRFCENSFRGEAPMQQDGQSEDI RKTSEVPFPRVFKPEVISMQSAPFSVHPFLHSQYQLLSENQYLNHLQYFDSISFLRQMYPSLYQSWHQHSHLFGNDINSN ELMKYKRKGSMDSELNCSHSPVGTCSEASSFEADIAYPCREKSTSYRNDLCTVDKFDCLSHSGENHSPEIKDDKDVSYKT EMDSTDDNCLNSTNKLQSEVPLDLTKHSKSETVEELPRKTHIFGFKENPCSFKPEAYMDDSNGENMESLKVSNMKLQFQS ENSAFISPKLNALDLMNYESRSLTSLLAMGRSPERFHMSNSFKIKERYSCKFCGKCQPDPPFTDPHRGAAIQV |
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