Gene
| Gene Model ID | pfu_aug2.0_71.1_03551 |
|---|---|
| Locus | scaffold71.1 : 218198 ... 234816 : - |
| To GenomeBrowser | scaffold71.1:218198..234816 |
| Genes list of scaffold | scaffold71.1 |
| Synonym | pfu_aug1.0_12240.1_39302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_71.1_03551.t1 | 1 | 1 | Ski_Sno | 46 | 154 | 9.80909e-45 | 150.7 | 0.0 | 2.24208e-44 | 149.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_71.1_03551.t1 | gi|242014378|ref|XP_002427868.1| | dachshund, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_71.1_03551.t1 | gi|259013418|ref|NP_001158416.1| | dachshund homolog 1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_71.1_03551.t1 | gi|585712144|ref|XP_006824867.1| | PREDICTED: dachshund homolog 1 isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_71.1_03551.t1 | gi|585712140|ref|XP_006824866.1| | PREDICTED: dachshund homolog 1 isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_71.1_03551.t1 | gi|585712148|ref|XP_006824868.1| | PREDICTED: dachshund homolog 1 isoform X3 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_71.1_03551.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03551.t1 atgatagcaacatcaactcccccgagggcacatacaagccagtgccttacccccgtgggtttgaacctgaccaaggattt gattgcaaccgccaaccaccagcacaacttgctcagcagtatgcataagtccacctactgtagcccgtccccagtggctt gcaaccccgacaacaatgtctgcaaagtcatcacctaccgtggggaaaaggtggcagccttcaatgtggagggtcgtgaa ctgatctgcctccctcaggcatttgaactttttctgaagcatcttgtgggagggctgcatacagtctacaccaagctgaa gagactggacatcacaccagtggtctgcaatgtcgaacaagtcagaattctacgaggacttggagcaatacaacctggtg tcaacagatgtaagctgatcagctgtaaagaatttgacatcctctatgaagactgcacaaactccagtgcccgtccagga cgacctccaaagagaagtccgtctctccacgccagccccgatactatagagaagctgaagaaatgcagagtggaaggaga ttatccttttgatccaaggatttatgacagaaagccgtatataaatggctttgcttacaatccctatgccatgagtcatc tcccctttatgaccatgcctcctatgaacatgctgacacagcctgggtccatggtagggattggaccacaccttgcgtcc cggtctgaccatattggaagcttagagaggccgaaatcaggatttgacttaatgccccaaaggtcaaagtatgatggaag tctttcaattaccaatagcttgtctgacaaagatgctagaagtgatgtattgcaaagggagaaagagtgctggtcagaag acgaagacaatcgaccactaaacctacaagtcaacggaaaaggaagtgacatcaatccccgagaatcgtgtctaaaagat gacaaagacgatgatagacgatctgatgacgatgatatttccacagatgaaaacgataacgacgatttcggtgcaagaca tcggtcattgaatccaaccattccaaagcaatccaatgatttatccatacctcatcacaaactgaccaatggcgatcttc aggatgtcccctccatagaagccattttgttgaacatacagcgcttgcttgaagtagctacggagaacgcacgtaggcag gaactccatataaatttagaaaaagccgaattaaaaacagaactcagcaatgcaaagaaaataagagaagcgctggaaag ggacttgaacgaagagagaaaacaaaaagatgttctactaagaaagcttagacgtgagaaacatgcgaggaaaaaacttc aacgaaccaaaacaacttcaaaatcagacggtgacagagaaaatagagataatgaaaaagaagataagaacagtggacta agtagtgattctgatgaggataagttttcaaccagcagtaagtctaaagcagaatcaactgacgaggagaaagttgaaga tattcactcagaaagagggacttccctttttgatgacagaatgattatgagtctccagaaatcaagttcagacaatttcc caccgtctttattgggtaataccaaaacttttccgtttatcaacttcatgaatggtaatgtgtga |
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Protein
| Protein ID | pfu_aug2.0_71.1_03551.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03551.t1 MIATSTPPRAHTSQCLTPVGLNLTKDLIATANHQHNLLSSMHKSTYCSPSPVACNPDNNVCKVITYRGEKVAAFNVEGRE LICLPQAFELFLKHLVGGLHTVYTKLKRLDITPVVCNVEQVRILRGLGAIQPGVNRCKLISCKEFDILYEDCTNSSARPG RPPKRSPSLHASPDTIEKLKKCRVEGDYPFDPRIYDRKPYINGFAYNPYAMSHLPFMTMPPMNMLTQPGSMVGIGPHLAS RSDHIGSLERPKSGFDLMPQRSKYDGSLSITNSLSDKDARSDVLQREKECWSEDEDNRPLNLQVNGKGSDINPRESCLKD DKDDDRRSDDDDISTDENDNDDFGARHRSLNPTIPKQSNDLSIPHHKLTNGDLQDVPSIEAILLNIQRLLEVATENARRQ ELHINLEKAELKTELSNAKKIREALERDLNEERKQKDVLLRKLRREKHARKKLQRTKTTSKSDGDRENRDNEKEDKNSGL SSDSDEDKFSTSSKSKAESTDEEKVEDIHSERGTSLFDDRMIMSLQKSSSDNFPPSLLGNTKTFPFINFMNGNV |
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