Gene
| Gene Model ID | pfu_aug2.0_71.1_03552 |
|---|---|
| Locus | scaffold71.1 : 277432 ... 294556 : - |
| To GenomeBrowser | scaffold71.1:277432..294556 |
| Genes list of scaffold | scaffold71.1 |
| Synonym | pfu_aug1.0_7708.1_31434 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dachshund homolog partial | GO:0001078 GO:0005515 GO:0005654 GO:0005730 GO:0010944 GO:0030336 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_71.1_03552.t1 | 1 | 1 | Ski_Sno | 56 | 165 | 1.4013e-45 | 153.4 | 0.0 | 2.8026e-45 | 152.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_71.1_03552.t1 | gi|260832832|ref|XP_002611361.1| | hypothetical protein BRAFLDRAFT_120332 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_71.1_03552.t1 | gi|395527445|ref|XP_003765857.1| | 0.0 | |
| pfu_aug2.0_71.1_03552.t1 | gi|628601831|ref|NP_004383.4| | dachshund homolog 1 isoform c [Homo sapiens] | 0.0 |
| pfu_aug2.0_71.1_03552.t1 | gi|119600915|gb|EAW80509.1| | dachshund homolog 1 (Drosophila), isoform CRA_b [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_71.1_03552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03552.t1 atgatgatggaatcaccacttcttcataaatctgacttgcgactttcaccacctcgggcccacaccagtcctggaccgac ccccgggacaatcagcttgacccacgggatgattgctacagttaatcaccagaatagcttattgagcaaactgcataagg cgtcgacgtatagcagtcccccaccggtggcatgcaaccccgacaacaatgtctgcaaagtcatcacctaccgtggggaa aaggtggcagccttcaatgtggagggtcgggaactgatctgcctccctcaggcatttgaactttttctgaagcatcttgt gggagggctgcatacagtctacaccaagctaaagagactggacatcacaccagtggtctgcaatgtcgaacaagtcagaa ttctacgaggacttggagcaatacaacctggtgtcaacagatgtaagctgatcagctgtaaagaatttgacatcctctat gaagactgcacaaattctagtgcccgtcccggtcgtccaccaaagagaagtccgtctatccatgccagccccgaaacatt ggaaaaactgaagaaatgcagagtggacggagactacccatttgaccccagactctacgacagaaaagcgttcctgaatg gcttcgctcaccacccttatgccatgggccatcttccttttatgcctctcaaccctgtcaatatgttggcaaatcctgtt tccatggcaatgccctctcaccttggcttcagacctgacggaggaattatgaaggacaggtcaagctcagaatccgatat tctttctccgaggatgagagatgataggtacgagtccatacataaagtagggaatctaaccccgccctatgacaacgaaa gacacaaagatcacatggattacgatacagaactaaagatggaattactccgcgagagagaagtcagagaaggtctagag aaacaactccaagaagaacagaaaaataaagtcatgcttataaagcgagttaaaagggaaaagagggtacgcaaaagact gcaggagcaaatgggtgtgggctcatcagaggatcccaaaaataactctaactgcgacaatgtcagcgttactagtcagg actccgataaacataatgagtcatttcacgagaaagaagcagacaaagatacagtttccgactcagacaaaaagtcaacc aatgatgttaaagtagacagaccaagccatctgtttgagaaccttctatcaccaaataacaacaatacgggaagcagtaa taacaacaataccgggggtggcaccaacaggtttccatacctacctctcaccaaaggagatatgaaagcttgttaa |
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Protein
| Protein ID | pfu_aug2.0_71.1_03552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03552.t1 MMMESPLLHKSDLRLSPPRAHTSPGPTPGTISLTHGMIATVNHQNSLLSKLHKASTYSSPPPVACNPDNNVCKVITYRGE KVAAFNVEGRELICLPQAFELFLKHLVGGLHTVYTKLKRLDITPVVCNVEQVRILRGLGAIQPGVNRCKLISCKEFDILY EDCTNSSARPGRPPKRSPSIHASPETLEKLKKCRVDGDYPFDPRLYDRKAFLNGFAHHPYAMGHLPFMPLNPVNMLANPV SMAMPSHLGFRPDGGIMKDRSSSESDILSPRMRDDRYESIHKVGNLTPPYDNERHKDHMDYDTELKMELLREREVREGLE KQLQEEQKNKVMLIKRVKREKRVRKRLQEQMGVGSSEDPKNNSNCDNVSVTSQDSDKHNESFHEKEADKDTVSDSDKKST NDVKVDRPSHLFENLLSPNNNNTGSSNNNNTGGGTNRFPYLPLTKGDMKAC |
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