Gene
| Gene Model ID | pfu_aug2.0_71.1_03555 |
|---|---|
| Locus | scaffold71.1 : 327708 ... 335776 : - |
| To GenomeBrowser | scaffold71.1:327708..335776 |
| Genes list of scaffold | scaffold71.1 |
| Synonym | pfu_aug1.0_27008.1_47815 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_71.1_03555.t1 | 1 | 1 | UPF0121 | 33 | 268 | 0.0 | 342.3 | 0.0 | 0.0 | 342.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_71.1_03555.t1 | gi|676440560|ref|XP_009049216.1| | hypothetical protein LOTGIDRAFT_186614 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_71.1_03555.t1 | gi|524874219|ref|XP_005093848.1| | PREDICTED: transmembrane protein 33-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_71.1_03555.t1 | gi|524874221|ref|XP_005093849.1| | PREDICTED: transmembrane protein 33-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_71.1_03555.t1 | gi|348511735|ref|XP_003443399.1| | PREDICTED: transmembrane protein 33-like isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_71.1_03555.t1 | gi|632944176|ref|XP_007887356.1| | PREDICTED: transmembrane protein 33 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_71.1_03555.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03555.t1 atgagtgacaacagtagtggaggaaatactggagcagaaaacacagggaatgctgggacggagagtacaggaaatgctgg gacgggaaatactggcaatcagcagactgttctgaattacatgctgtcaaacaaagtagaagcaggattatggctgacga gggtatttactgtggtgtgtacagtcctcttcttcttccctatcattggtgacaacccatatggattttaccagcgagtg tttatcagtagtgcagctaccagcgccctaaggttacatcagcgactaccacacatacagttcagtcgacagttcatggg aatgttatttgcagaggacagctgtcattatcttatattctcactcatctttatgaatagttacccaattacaatggctc tcattccagtgtttttattcgcacttcttcatgcatgttcttacacaaagaacctactgaatgtaatgggtccccagtcc atgcagattatcagaagtctcatagacaaattaacgcagcagcagataaacattctgagatttattgcctgtactgagat tttccttatgccagccgtattcttcatgatctttgtgggaaagtgtagtatcttcttaccagccatttactacagattcc tgacattacgatatgcttctcgcagaaatccttactgcagaacattgtttagtgagttgagaatgacgatagaacatttt atctcgagacctcaatgtccgggtttcctgaggaatgcgctaacgaaaggtatcgccctaatatcacgtttggctccaca agtggctcattga |
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Protein
| Protein ID | pfu_aug2.0_71.1_03555.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03555.t1 MSDNSSGGNTGAENTGNAGTESTGNAGTGNTGNQQTVLNYMLSNKVEAGLWLTRVFTVVCTVLFFFPIIGDNPYGFYQRV FISSAATSALRLHQRLPHIQFSRQFMGMLFAEDSCHYLIFSLIFMNSYPITMALIPVFLFALLHACSYTKNLLNVMGPQS MQIIRSLIDKLTQQQINILRFIACTEIFLMPAVFFMIFVGKCSIFLPAIYYRFLTLRYASRRNPYCRTLFSELRMTIEHF ISRPQCPGFLRNALTKGIALISRLAPQVAH |
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