Gene
| Gene Model ID | pfu_aug2.0_71.1_03557 |
|---|---|
| Locus | scaffold71.1 : 371887 ... 394751 : + |
| To GenomeBrowser | scaffold71.1:371887..394751 |
| Genes list of scaffold | scaffold71.1 |
| Synonym | pfu_aug1.0_2205.1_01015 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase isozyme l3 | GO:0005622 GO:0008233 GO:0019538 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_71.1_03557.t1 | 1 | 1 | Peptidase_C12 | 53 | 251 | 0.0 | 156.5 | 0.0 | 4.2039e-45 | 153.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_71.1_03557.t1 | gi|676462685|ref|XP_009056349.1| | hypothetical protein LOTGIDRAFT_204019 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_71.1_03557.t1 | gi|260833566|ref|XP_002611728.1| | hypothetical protein BRAFLDRAFT_268698 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_71.1_03557.t1 | gi|62859177|ref|NP_001017120.1| | ubiquitin carboxyl-terminal hydrolase isozyme L3 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_71.1_03557.t1 | gi|573903432|ref|XP_006639439.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_71.1_03557.t1 | gi|697849869|ref|XP_009645293.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Egretta garzetta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_71.1_03557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03557.t1 atgtctcacgttggctcagatgttggcgtgagggggtccacggagcaggaggaaaccggagtacccggagaaaaaccccc tgcagaggcctgggtgggggaccaccaatcctcccacataagacccattgccgaatctgagattcgatcccgggacctta gagaggctgatttgctggcaatggtacccaaacctgttctggcagttgtgttgctttttccaatcaatgaaaagacggag caaaatcctataggagaagtgaagccagaatcagatgtgttctttgtaaagcagacaatcaggaatgcatgtgggaccgt ggcaatagttcattctttagccaataatgatgataaaattgactttgcagttatagaattcctaggatactgtattgaaa tgaattcatctagctctgaaattttgatttcttggctgantaaccaggaggagacattaaaactgagaccacaaggcaga gctgattacctggagaaagatatggtagactatacttacaaggtcaaatatgaggacatgggaagggcccatgaatccac tgcccaggagggacagacacaggcaccatccagagaagatgaagtgaacacacattttgtagcttttgtccacaagaatg gaaatctttatgaattagatggacgtaaggacgcccctactcaccatggcactactactgcggatactctattagaggat gcaatagtagtggctaaaaaattcatggcgagggacccggagcaacttaactttactctgatggcactggcggtagcgca atga |
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Protein
| Protein ID | pfu_aug2.0_71.1_03557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03557.t1 MSHVGSDVGVRGSTEQEETGVPGEKPPAEAWVGDHQSSHIRPIAESEIRSRDLREADLLAMVPKPVLAVVLLFPINEKTE QNPIGEVKPESDVFFVKQTIRNACGTVAIVHSLANNDDKIDFAVIEFLGYCIEMNSSSSEILISWLXNQEETLKLRPQGR ADYLEKDMVDYTYKVKYEDMGRAHESTAQEGQTQAPSREDEVNTHFVAFVHKNGNLYELDGRKDAPTHHGTTTADTLLED AIVVAKKFMARDPEQLNFTLMALAVAQ |
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