Gene
| Gene Model ID | pfu_aug2.0_71.1_03558 |
|---|---|
| Locus | scaffold71.1 : 411380 ... 416016 : - |
| To GenomeBrowser | scaffold71.1:411380..416016 |
| Genes list of scaffold | scaffold71.1 |
| Synonym | pfu_aug1.0_2205.1_01014 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| krueppel-like factor 5 | GO:0003676 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_71.1_03558.t1 | 4 | 1 | zf-H2C2_2 | 390 | 403 | 3.9e-09 | 36.3 | 0.15 | 540.0 | 1.1 |
| pfu_aug2.0_71.1_03558.t1 | 3 | 1 | zf-C2H2 | 393 | 415 | 1.5e-10 | 40.7 | 4.9e-06 | 0.018 | 15.3 |
| pfu_aug2.0_71.1_03558.t1 | 3 | 1 | zf-C2H2_4 | 393 | 415 | 9.9e-06 | 25.5 | 0.00065 | 2.4 | 8.6 |
| pfu_aug2.0_71.1_03558.t1 | 4 | 2 | zf-H2C2_2 | 407 | 425 | 3.9e-09 | 36.3 | 9.0e-08 | 0.00033 | 20.7 |
| pfu_aug2.0_71.1_03558.t1 | 3 | 2 | zf-C2H2 | 421 | 445 | 1.5e-10 | 40.7 | 2.1e-06 | 0.0077 | 16.5 |
| pfu_aug2.0_71.1_03558.t1 | 3 | 2 | zf-C2H2_4 | 421 | 445 | 9.9e-06 | 25.5 | 2.8e-05 | 0.1 | 12.9 |
| pfu_aug2.0_71.1_03558.t1 | 4 | 3 | zf-H2C2_2 | 438 | 461 | 3.9e-09 | 36.3 | 2.0e-10 | 7.5e-07 | 29.1 |
| pfu_aug2.0_71.1_03558.t1 | 3 | 3 | zf-C2H2 | 451 | 473 | 1.5e-10 | 40.7 | 1.1e-07 | 0.00042 | 20.4 |
| pfu_aug2.0_71.1_03558.t1 | 3 | 3 | zf-C2H2_4 | 451 | 473 | 9.9e-06 | 25.5 | 5.9e-06 | 0.022 | 15.0 |
| pfu_aug2.0_71.1_03558.t1 | 4 | 4 | zf-H2C2_2 | 466 | 477 | 3.9e-09 | 36.3 | 0.2 | 740.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_71.1_03558.t1 | gi|524872346|ref|XP_005092935.1| | PREDICTED: transcription factor Sp8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_71.1_03558.t1 | gi|676434161|ref|XP_009047136.1| | hypothetical protein LOTGIDRAFT_111402 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_71.1_03558.t1 | gi|585657312|ref|XP_006815816.1| | PREDICTED: KLF534-like protein isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_71.1_03558.t1 | gi|733899251|ref|XP_010713624.1| | PREDICTED: Krueppel-like factor 5 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_71.1_03558.t1 | gi|269784849|ref|NP_001161576.1| | KLF534-like protein [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_71.1_03558.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03558.t1 atggctaacacggaatttatgataaacgataattcggttgagtttttcgatgaccaaatagtgccggatcaggacgactg tttcctccctcccaacgaggtggccctttcacaacagtggaatgttgtgaccgatttcgagaagtacctatcgccgaatg atttggctttgaatgcaaagaagaacaggcgagagagttcatctctcgtggatgaattttttcaggatgacaagaattcg ccagaactgacgagcgccaaggagagaatcagtcagctaaccaggaatggatttgctgagttcgggcatcttcgtaccgg gcttatccgacaaccgccagagatggtcaggcgcgactccagggaaggggacgatacaggagctgaagatttcttcacgg aatctaatctgaagaagctcgggttcttgaagtcccccgcgaaaatgaagactgatgctagagttttcgacatatcagaa accgttatggacaccagtactatagtccctaataattttaacgagcttcaagagcagagtcgacaagtggacgattcaat ctgggaagacctaaaagacagtatgaacatggtgaatgctaatgactctagagatgcagacgttatagtcaaacgtgaag aaaattttaagccatgccagtttcaaaatgttaaaaattcatgttcattcgataacgtatctgtaaagatagaaccttct acatctagttgtttgatggcgaaatccaattcatgtgaaaacctaagttcacgaccgacaactctaccagtttctcaaca agtcatggcaggttcctcaatagcacagtatctcgcacagatgaataacatgagtaaatcccacgtaacatctaacagaa atttcattcccacatcaacaccgccccatatggttccggtcctcatgccccctaccccacccagttcagagcccaatagt cccagtcaagactacgtcagaaggacaccgccacccccgtatccagggctgcaaagttctatgaacattttcaatcagtt ggcaattcagcctattccttttaactccaaccctaaaaggagtacgaccaagccccagcagactcaccctggatgctcca ctatcaagtacaataggaaaaacaacccggagctcgaaaagaggagaattcatttctgtgactatccaggttgcagaaaa gcttacacgaaaagttcccacttgaaagcacatcaaagaatccatacaggagagaagccgtacaaatgtcatttccagaa ctgtatgtggagattcgctcgttctgacgagttgacacgtcacatccggaaacacaccggcgcaaagcccttcaaatgta aagtttgcgagcgatgctttgcacgatctgatcatctggccctccacatgaaacgtcacgaacccaagaagtga |
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Protein
| Protein ID | pfu_aug2.0_71.1_03558.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_71.1_03558.t1 MANTEFMINDNSVEFFDDQIVPDQDDCFLPPNEVALSQQWNVVTDFEKYLSPNDLALNAKKNRRESSSLVDEFFQDDKNS PELTSAKERISQLTRNGFAEFGHLRTGLIRQPPEMVRRDSREGDDTGAEDFFTESNLKKLGFLKSPAKMKTDARVFDISE TVMDTSTIVPNNFNELQEQSRQVDDSIWEDLKDSMNMVNANDSRDADVIVKREENFKPCQFQNVKNSCSFDNVSVKIEPS TSSCLMAKSNSCENLSSRPTTLPVSQQVMAGSSIAQYLAQMNNMSKSHVTSNRNFIPTSTPPHMVPVLMPPTPPSSEPNS PSQDYVRRTPPPPYPGLQSSMNIFNQLAIQPIPFNSNPKRSTTKPQQTHPGCSTIKYNRKNNPELEKRRIHFCDYPGCRK AYTKSSHLKAHQRIHTGEKPYKCHFQNCMWRFARSDELTRHIRKHTGAKPFKCKVCERCFARSDHLALHMKRHEPKK |
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