Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_711.1_04506
Locus scaffold711.1 : 63023 ... 88545 : -
To GenomeBrowser scaffold711.1:63023..88545
Genes list of scaffold scaffold711.1
Synonym pfu_aug1.0_41360.1_70406

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_711.1_04506.t1 gi|156384934|ref|XP_001633387.1| predicted protein [Nematostella vectensis] 0.0
pfu_aug2.0_711.1_04506.t1 gi|557774393|ref|XP_005186845.1| PREDICTED: coiled-coil and C2 domain-containing protein 1-like isoform X2 [Musca domestica] 0.0
pfu_aug2.0_711.1_04506.t1 gi|557774391|ref|XP_005186844.1| PREDICTED: coiled-coil and C2 domain-containing protein 1-like isoform X1 [Musca domestica] 0.0
pfu_aug2.0_711.1_04506.t1 gi|751448369|ref|XP_011178363.1| PREDICTED: coiled-coil and C2 domain-containing protein 1-like [Bactrocera cucurbitae] 0.0

Transcript
Transcript IDpfu_aug2.0_711.1_04506.t1
Definition-
>pfu_aug2.0_711.1_04506.t1
atgagggatataggaagtgatgaggaagtttcggacacggatgaccctgatttactggcagagttacaggacttggagga
agatgacactcctgcccctgccccctccccatcacatactaataactctgcacagactcctgtgataaagaaaccagaag
tgaacatagttagtgtattagatgacagactgagcatgtataagacggctatggagaatgctaaatcagccggagacgga
tcaaaacaaaggagattggatagaggcattaagtcaattcaagatttgatgaagaaggcaaaggctaacaaaccaatatc
agaggatgatatccctccccctgtggctctaggtgctccttctagaggatcttccccagcaaacaccccagaagaaggaa
aagaaatagatctgtccaaaatgccccctcctccccccgcctcttctggctcaaataccaatgttgcagtacggacagca
ccaacacagcccaaagttcaaaggtcatcaatgcaggcagcaggggagacaactcctgatgtagtggttcctcctccccc
ttctgctgaggaggagaagaagatatttggtgccccagaagctcctagaaatgccatggaagcattacaacagaggttac
agaaataccaacaaacagaggcggaagccaaggagaaaggagagggctctaaagccaggagatacggcagaattgttaag
cagtaccaggatgccattaaagctgttaaagctggaagagcgtttgattttgatgagcttcctacacctccaggttttgc
accaatacctacagggggctccccagctaaatctccgtctagttcacaaactacccagaatgctgctgctggtgctcctg
tggccaatcagagactgcagcctccagggtcatcgccacagaaacagagaacaccctctccatcacgtaaagctgaacct
gcccagcctcctcaacaacctccgcaacaagcccagaaaactccccaacgtcaaacatccagaaactcattaaagaaaag
tccaacatcccgagctgagcagcaagcctacttccttacagatagaatgaatgaatataagcaggctgcactcaaagcca
aacgtagtaataatatagagctagccaaaaagtacatcagaattgccaagggttttgaaccaatgatagaagcagcagaa
agtggtttacctgtggatatgtcaaagataccgccatctctagaggaggaggcagagccctctacagtgttggtagataa
agcagaggtagagctgagtggggatcgtacagaggtgttcaagaagcttgaacaggaccttataaaacaaattagaacat
gtgcaactaatcagcaacattttacaaagcttggtgatgttatgtctgctgccaagtttgagaaaatggagcaaggttgt
cggaaggaactagatgcattaaagaatgccttcaagcataatgatcccgtacctaagtttcattacgagaataggacttt
ttcaatggttcaatgtaatacagatttaggggaaaatgatttagaaataacagttgttagaggaatacaatttagtttac
cagataaatattcagagaaagacttcgatacttttgtaaagcttgagtttccatttcctacggnaaatcttttttctcaa
aacatcactataaagagaatacttcaggttgatgacccacagacaggacagacagacacaagtaaaggaagctgtaatcc
agaatataatacaccaatcaaagtagaaattagtagaaaatccagggcatttgcaagagttgtagaaaggaagagctgta
aatttgaaatctaccataaaagtacacgatag

Protein
Protein IDpfu_aug2.0_711.1_04506.t1
Definition-
>pfu_aug2.0_711.1_04506.t1
MRDIGSDEEVSDTDDPDLLAELQDLEEDDTPAPAPSPSHTNNSAQTPVIKKPEVNIVSVLDDRLSMYKTAMENAKSAGDG
SKQRRLDRGIKSIQDLMKKAKANKPISEDDIPPPVALGAPSRGSSPANTPEEGKEIDLSKMPPPPPASSGSNTNVAVRTA
PTQPKVQRSSMQAAGETTPDVVVPPPPSAEEEKKIFGAPEAPRNAMEALQQRLQKYQQTEAEAKEKGEGSKARRYGRIVK
QYQDAIKAVKAGRAFDFDELPTPPGFAPIPTGGSPAKSPSSSQTTQNAAAGAPVANQRLQPPGSSPQKQRTPSPSRKAEP
AQPPQQPPQQAQKTPQRQTSRNSLKKSPTSRAEQQAYFLTDRMNEYKQAALKAKRSNNIELAKKYIRIAKGFEPMIEAAE
SGLPVDMSKIPPSLEEEAEPSTVLVDKAEVELSGDRTEVFKKLEQDLIKQIRTCATNQQHFTKLGDVMSAAKFEKMEQGC
RKELDALKNAFKHNDPVPKFHYENRTFSMVQCNTDLGENDLEITVVRGIQFSLPDKYSEKDFDTFVKLEFPFPTXNLFSQ
NITIKRILQVDDPQTGQTDTSKGSCNPEYNTPIKVEISRKSRAFARVVERKSCKFEIYHKSTR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495