Gene
| Gene Model ID | pfu_aug2.0_711.1_04512 |
|---|---|
| Locus | scaffold711.1 : 214047 ... 229171 : + |
| To GenomeBrowser | scaffold711.1:214047..229171 |
| Genes list of scaffold | scaffold711.1 |
| Synonym | pfu_aug1.0_19570.1_11235 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coiled-coil domain-containing protein mitochondrial-like | GO:0003677 GO:0006351 GO:0046872 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_711.1_04512.t2 | 4 | 1 | Trichoplein | 71 | 82 | 1.4e-33 | 115.7 | 0.077 | 1100.0 | -2.4 |
| pfu_aug2.0_711.1_04512.t2 | 4 | 2 | Trichoplein | 128 | 179 | 1.4e-33 | 115.7 | 1.0 | 15000.0 | -8.0 |
| pfu_aug2.0_711.1_04512.t2 | 4 | 3 | Trichoplein | 198 | 327 | 1.4e-33 | 115.7 | 3.1e-31 | 4.6e-27 | 94.3 |
| pfu_aug2.0_711.1_04512.t2 | 4 | 4 | Trichoplein | 325 | 404 | 1.4e-33 | 115.7 | 2.7e-13 | 4.0e-09 | 35.3 |
Transcript
| Transcript ID | pfu_aug2.0_711.1_04512.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_711.1_04512.t1 atgcctggcagtgcaatttctgcggcaggaagttctgcctcatcatcttcatcaaaacgaggcaaaactcgtaattatcg agttgttagtaacacatcacaggtagatgaatccctttttggacagcctaaccatgtgcagcaaaggggtgaaattctta aagataaatttgacattaatgacaatgaagtaacaatagaagatttagctagagagagaagtgcaaaaaggaaaaacaga aagaaaagtaataacagtggaaaggaaacagttcaagtaatcacaaaagatttgatcagaaatctcatagtacccactga agacccttcaggccagtcaataatcctgcccagacatgaatttcacagaattgtaatggaagcccaggtcaaaactaagg aacaaagagaaatggagatagaagcctacaaaagacagaagcaagaacttattgaggctagtcaagaaagaaaaaatcag atgaaacaattagacatggagagaagaaagaatgagaaactaaacgatttagaggaggaagctaaggagaatgcggagca cctactagccaaagctaacgccatgaggcaagaacaggaagacgagattaaacacttaaatgagcttatactgaatgcca agtgccacgccatcagagacgctcaaatcctggagaaacggcagatcaagggagagatgacagaggaggagaaacgttta gatgtaatgatggaagtggacagacagaatgccattgttatccaggaggagatagagaagaagcgtaaggaggaaaggtt actaggagctgccaaactcctcgatcaaattcaggagaacgaacaggagcgactgtttgaactggaacgtaaagatcagg aaaatatacagatgcagaaatatatcgagaaaatgatggaggaagacaaagtcagtctggagaagaagaggactgagcaa ctgtccctcaggaaggagcttgtggagaaagagaggcgtgaggaggatgaacataagaagaagaggttggtgcatgcgga agacgtccgcaaacagatccgcaaaaaagaacaagacagagttctggagaggaatgcgttctttgaggagggagtgaagc tggacgaacaggcacgagagaggaggcagaaactggaggaagtgaagaagaagaaattaaacgacctcagggctgccggc attccggagaaatacgtatcacacgttgcccacaaagtcaacgtagtggcgtcataa |
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| Transcript ID | pfu_aug2.0_711.1_04512.t2 |
| Definition | - |
>pfu_aug2.0_711.1_04512.t2 atgcctggcagtgcaatttctgcggcaggaagttctgcctcatcatcttcatcaaaacgaggcaaaactcgtaattatcg agttgttagtaacacatcacaggtagatgaatccctttttggacagcctaaccatgtgcagcaaaggggtgaaattctta aagataaatttgacattaatgacaatgaagtaacaatagaagatttagctagagagagaagtgcaaaaaggaaaaacaga aagaaaagtaataacagtggaaaggaaacagttcaagtaatcacaaaagatttgatcagaaatctcatagtacccactga agacccttcaggccagtcaataatcctgcccagacatgaatttcacagaattgtaatggaagcccaggtcaaaactaagg aacaaagagaaatggagatagaagcctacaaaagacagaagcaagaacttattgaggctagtcaagaaagaaaaaatcag atgaaacaattagacatggagagaagaaagaatgagaaactaaacgatttagaggaggaagctaaggagaatgcggagca cctactagccaaagctaacgccatgaggcaagaacaggaagacgagattaaacacttaaatgagcttatactgaatgcca agtgccacgccatcagagacgctcaaatcctggagaaacggcagatcaagggagagatgacagaggaggagaaacgttta gatgtaatgatggaagtggacagacagaatgccattgttatccaggaggagatagagaagaagcgtaaggaggaaaggtt actaggagctgccaaactcctcgatcaaattcaggagaacgaacaggagcgactgtttgaactggaacgtaaagatcagg aaaatatacagatgcagaaatatatcgagaaaatgatggaggaagacaaagtcagtctggagaagaagaggactgagcaa ctgtccctcaggaaggagcttgtggagaaagagaggcgtgaggaggatgaacataagaagaagaggttggtgcatgcgga agacgtccgcaaacagatccgcaaaaaagaacaagacagagttctggagaggaatgcgttctttgaggagggagtgaagc tggacgaacaggcacgagagaggaggcagaaactggaggaagtgaagaagaagaaattaaacgacctcagaaatgccggt attccagataaatatttggctcaagtggaaagaaaggtcaatcaaccacagcatattagtgcataa |
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Protein
| Protein ID | pfu_aug2.0_711.1_04512.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_711.1_04512.t1 MPGSAISAAGSSASSSSSKRGKTRNYRVVSNTSQVDESLFGQPNHVQQRGEILKDKFDINDNEVTIEDLARERSAKRKNR KKSNNSGKETVQVITKDLIRNLIVPTEDPSGQSIILPRHEFHRIVMEAQVKTKEQREMEIEAYKRQKQELIEASQERKNQ MKQLDMERRKNEKLNDLEEEAKENAEHLLAKANAMRQEQEDEIKHLNELILNAKCHAIRDAQILEKRQIKGEMTEEEKRL DVMMEVDRQNAIVIQEEIEKKRKEERLLGAAKLLDQIQENEQERLFELERKDQENIQMQKYIEKMMEEDKVSLEKKRTEQ LSLRKELVEKERREEDEHKKKRLVHAEDVRKQIRKKEQDRVLERNAFFEEGVKLDEQARERRQKLEEVKKKKLNDLRAAG IPEKYVSHVAHKVNVVAS |
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| Protein ID | pfu_aug2.0_711.1_04512.t2 |
| Definition | - |
>pfu_aug2.0_711.1_04512.t2 MPGSAISAAGSSASSSSSKRGKTRNYRVVSNTSQVDESLFGQPNHVQQRGEILKDKFDINDNEVTIEDLARERSAKRKNR KKSNNSGKETVQVITKDLIRNLIVPTEDPSGQSIILPRHEFHRIVMEAQVKTKEQREMEIEAYKRQKQELIEASQERKNQ MKQLDMERRKNEKLNDLEEEAKENAEHLLAKANAMRQEQEDEIKHLNELILNAKCHAIRDAQILEKRQIKGEMTEEEKRL DVMMEVDRQNAIVIQEEIEKKRKEERLLGAAKLLDQIQENEQERLFELERKDQENIQMQKYIEKMMEEDKVSLEKKRTEQ LSLRKELVEKERREEDEHKKKRLVHAEDVRKQIRKKEQDRVLERNAFFEEGVKLDEQARERRQKLEEVKKKKLNDLRNAG IPDKYLAQVERKVNQPQHISA |
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